Austrofundulus limnaeus (annual killifish): 106534511
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Entry
106534511 CDS
T06063
Symbol
eme1
Name
(RefSeq) crossover junction endonuclease EME1 isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03440
Homologous recombination
alim03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106534511 (eme1)
03460 Fanconi anemia pathway
106534511 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106534511 (eme1)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106534511 (eme1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
MDFI
Motif
Other DBs
NCBI-GeneID:
106534511
NCBI-ProteinID:
XP_013886618
UniProt:
A0A2I4D307
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MRSCQCSPSSPGKVKHLSVSKTCFQPSACLQSMVGDSDSTSDLDEELPVFTFLQPAGSSS
LTCQRGAAGPAVMLISSDSDDEEPDVPLAQRLKHRQDASISTSSVLHRGGGAELGLPSEQ
VKQTSQVEDGAPLKNRAKRTAEEVQESREQAVRRRRRQLTDTQQEQQRRAVAQAARALRP
DECIKHMLVCVDPAVLQVEGGGALLAAVQALGCSCVVERQVIPRSVSWARSAPCGQQDEG
GCVPEDHVVMQMTSDDFIPLIHSYIQEARHGRSDCGPTLTTWIQQQQRTHPNKTLSLAVM
ELEKYFRVKKSHSQKKFREAVVGEETRGKKGRKAGAEGLPEVSRVDVEEALVHLQLHSNV
SVQFLSTWKEFSDYITMTTKAVAEAPYKREREKTGFSFYLESEWAGGQRVEKGGKGLLQV
WKRQIQQLSRVSPDVAAAILAEYPSPHLLRKAYSQCRTESHKVSVLSGLLIRRGEGITST
TRRVGPELSKRLYLMMHCSDPEYVLDGSL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaggagctgccagtgttcaccttcttcacccgggaaagtcaaacatttgtccgtttct
aaaacctgctttcaaccgtctgcgtgcctgcagagcatggtgggtgacagtgacagcacc
agtgacctggatgaggagctgccagtgttcaccttcctgcagccagctggcagctccagc
ctgacgtgtcagagaggtgcagctggacctgctgtgatgctgatcagcagtgattcagat
gatgaggagcctgatgttcctctggcacagagactcaaacacagacaggatgcttccatc
agcacctcctctgtgctccaccgaggaggaggagctgagctgggtttaccttctgaacag
gtgaaacaaaccagccaggtggaggatggtgctcctctaaagaacagagccaagaggaca
gcagaggaggtgcaggagtccagggagcaggctgtgaggaggaggaggaggcagctcaca
gacacacagcaggaacaacagaggagagctgtggctcaggctgccagggctctgaggcca
gacgagtgcatcaaacacatgctggtgtgtgtggatccagctgtcctgcaggtggaaggg
ggcggggctctgctggctgcagtgcaggctctgggctgcagctgtgtcgttgaaagacaa
gtcatccctcgcagtgtcagctgggcccggagcgccccctgtggtcagcaggatgaaggg
ggctgtgtacctgaggatcatgttgtgatgcagatgacttcagatgacttcattcctctg
atccacagctacatccaggaagcaaggcatggcaggtcagactgtggtcccaccctgacc
acctggatccagcagcagcagaggacacaccccaacaaaaccctcagtctggcagtcatg
gagctggagaaatatttcagagtgaagaagtctcacagccagaagaagttcagagaggct
gtcgttggagaggaaaccaggggaaagaaaggcaggaaagctggagctgaggggttacct
gaggtttccagagttgatgtagaggaggcattggtgcatctccagcttcactcgaacgtc
tcggtccagttcttatcaacatggaaagagttctcagattacatcacaatgacaacaaaa
gcagttgcagaggcaccatacaagagagagcgagagaagacgggcttctccttctacctg
gagagtgagtgggcggggggccagcgggtggagaaaggtggtaaaggtctgctgcaggtg
tggaagaggcagatccaacagctcagcagagtcagtccagatgtagctgctgctatcctg
gcagagtatccctccccccacctactcaggaaggcctacagtcagtgcaggactgagagc
cataaggtctctgtgctctctgggctcctgatccgccggggagaaggcatcacctccacc
actcgaagagtcggcccggagctttccaaacgcctctatctgatgatgcattgttcagat
cctgaatacgtcctggatggcagcctctga
DBGET
integrated database retrieval system
