Austrofundulus limnaeus (annual killifish): 106534558
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Entry
106534558 CDS
T06063
Symbol
cdhr1
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106534558 (cdhr1)
Cell adhesion molecules [BR:
alim04515
]
Cadherins
Cadherin related
106534558 (cdhr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RibLong
Cadherin_4
Cadherin_2
ECSCR
Motif
Other DBs
NCBI-GeneID:
106534558
NCBI-ProteinID:
XP_013886698
UniProt:
A0A2I4D384
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MKKNKKTRVFLFLLLLHYSSGQSDYAPYFYDNGPSSTNGNMALFSISEDTPVGTQIYVLN
GTDPEGDPVRFGLXFEKGSTEYFRVDPKSGNVTLSQELDREKQDEISVIVSITDGRNKVV
ETVRVFVTDANDEPPEFQNLPFIIDVPEDTAPGSSIYRVRAVDKDMGSGGSVSYYLQSSS
FAKFTIDGHSGILRVKPGESLDYETTLTHFVTVVAKDGGGKYKGKHQVLTSTATVTINVL
DAQDMPPSFVGTPYFGYIYEVSVPGSEIYTVYAKDGDQGNPNSIHYSIINGSDGVFEINS
TSGCITLTTNPSLLENELYEIKVKASEVGPNSKTLDFDITTVTVRVVDLNNHPPTFYGEN
GPQSKFEVTMYEHPPAGEILRGFKITVNDSDQGANAKFKLRLVGPSRVLRVVPQTVLNEA
QVTIIVEDTSGIDFEKGQTLSFKLLAVEIDTPERFSATADIVINLLDTNDNVPSFTSEYY
IARVPENSPGGSSVVSVTANDPDSGPWGEVKYTIYGSGSDLFAIHPSSGLITTQPWTSLD
AEVRSKYNFYVKAEDSEGKYGLAEVFVTVLDMNDHPPEFDDKFLEKTMIIGTFVKVQAVD
EDAESPNNVIEYSIMTADPDNAFDINSDTGEIKLKPFIKSMEIVQNITKQKDCKWSLVVE
ARDRGSPSFSTTAVVNIDITEATPLKGPMAAFLMKSRDNPLKALGMVTFIIIVLVGVTVL
ISTVTYMRNSKANRITPVRRIVKKRPREQQTWNFKIPGIKFTNPMEKFLISDPESSPLQE
TISPRLKPPPPIAPCLPPPPPSNARAGERPRALPTISGALAYKGSKKTKPGRRKEGNISS
ALVSELKMKLEQKIHENNQGYC
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaacaagaaaacacgtgtattcctgtttctcctgctgcttcattacagttca
ggccaatcagattacgctccatatttttatgacaatggaccgagcagcacaaacgggaay
atggccttgttcagcatctcagaggatacacctgttggaacacagatatacgtcctgaat
gggacggatccagaaggggatccggtacgattcggtctcrcttttgaaaagggctccaca
gaatatttcagggtggatcccaagtctggaaacgtgactctgagtcaggagctcgacaga
gagaagcaagatgaaatctcagtgatagtgagcataacagatggccgcaacaaagttgtt
gagacagtgagagtgtttgtgacggatgccaacgatgagcctcccgaatttcaaaacctg
ccttttatcattgatgttccagaggacactgccccaggaagcagcatctacagagtccgt
gctgtggataaagacatgggttcaggcggcagygtttcatattatctacagagttcctca
tttgccaaattcaccattgatggacacagtgggatcctcagggtcaaaccaggcgagagt
ttggactacgaaaccacactgacacatttcgtgacggtggttgcaaaggatggaggtggg
aagtacaaggggaaacaccaggtgttgacatccacagccacagtaacaatcaatgttctg
gatgcccaagacatgcccccatccttcgtaggaactccatattttggttacatttacgaa
gtctccgttcctggatcagaaatatacacagtgtacgctaaagatggagatcaaggcaat
cccaactckatacattattccattataaatggcagtgatggtgtttttgaaataaatagc
accagcggatgcatcactctgacaaccaacccatctttgctggaaaacgagctttatgaa
ataaaagttaaggcgtctgaggtggggccgaacagcaaaacgctggacttcgacatcacc
acagtgacggtgcgggtggtggatctaaacaaccatcctccgaccttttatggcgaaaac
ggaccacagagcaagtttgaggtcacgatgtacgagcatccacctgcaggggagatcctc
cgaggctttaagatcactgtcaacgactctgatcagggagcaaacgctaaatttaaactg
aggctcgtggggccgagccgagtgcttcgtgtcgttcctcaaacggtcctaaatgaagct
caggtgaccatcatcgtagaggacacgtctggcatcgactttgaaaagggccagaccctc
tctttcaagctgctggcggtggagatcgacactcccgagcggttcagtgccacggctgac
atcgtgatcaacctgctggacacaaatgataacgtcccctcttttacatccgagtattac
atcgccagagtgcccgagaactctccgggaggctccagtgttgtgtctgtgacggcaaat
gatccagactckgggccctggggtgaagtcaaatacaccatttatggatcaggatcagat
ttgtttgccatccacccatcctcgggcctcatcaccacccagccctggaccagcctggay
gcagaggtcaggtcgaaatacaacttttatgtcaaggctgaggactcagagggcaaatat
ggcttggccgaagtctttgtcaccgtcctcgacatgaacgaccaccctccagagtttgay
gacaagttccttgagaagaccatgatcattggcacatttgttaaagtccaggcagtggac
gaggacgccgagtccccaaacaacgtcatcgagtactccatcatgacggcggatcccgac
aacgcgtttgacatcaactcagacaccggggagatcaaactgaagccgttcatcaagtcg
atggagatcgtccagaacatcaccaagcagaaagactgtaaatggtccctggtggtcgag
gccagggaccgaggctctccgtccttcagcacaacagctgtggtcaacattgatatcaca
gaagcgactcctctcaaggggcctatggcagcttttttaatgaaaagtagagacaatcct
ttaaaagctctaggtatggtcacttttatcattattgtattggtaggagtgacagttctg
atctctacggttacgtacatgcgcaactcaaaggcgaacaggatcacgccggtgagacgc
atcgttaagaagcgacccagggagcagcagacctggaacttcaagatacctggtatcaag
tttaccaaccccatggagaagttcctcatcagcgacccagaaagcagcccattgcaggaa
actatcagcccaaggctgaagcctccacctccgatcgccccttgtctgcctcctccacct
ccatctaacgctcgagccggcgagcgaccccgagcactcccgacaatatctggagcgctg
gcctacaaagggtccaagaaaacaaagcctggccgccgcaaagagggaaacatcagctct
gctttrgtgtctgagcttaaaatgaagctagagcagaaaatacatgagaataaccagggt
tattgytaa
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