Austrofundulus limnaeus (annual killifish): 106534715
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Entry
106534715 CDS
T06063
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03420
Nucleotide excision repair
alim04115
p53 signaling pathway
alim04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106534715 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
106534715 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
106534715 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106534715 (ddb2)
03400 DNA repair and recombination proteins [BR:
alim03400
]
106534715 (ddb2)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106534715 (ddb2)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106534715 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
106534715
NCBI-ProteinID:
XP_013886894
UniProt:
A0A2I4D3V2
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MVTGENRNRQCLQEPFVRSLSSYHFHGSSSPFDRRITCLEWHPTHPTTLAAATKGGDILM
LNYTNPTKESFFQGNGAGDSIGGMKFCPTDFSKVYLASGEGTLTLKSFEGHPSTLLSRTG
DCDHDYHNVCFRFRDLGNHQVSWVLFGSCRSQQRVPAGQCQLTGQTVTEHLEGEPAAVRT
LLRRLKGCLGVFQAEAHHTGWIFSDKLHRAKVTHAEFNPRYDWLLATASVDHTVKLWDLR
NLKDKKSFLYELPHEKAVNSAYFNPSDCSKLLTTDQNDQIRVYASCDWTKPQQIIQHPHR
QFQHLTPIKATWHPIYDLIVAGRYPDDRICTGDEKTIDIFDSNSGELVFQLYDPVASGIK
SVNKFSPRGDVIGSGMGVTLLLWDHDESLLGDGQKPQEEMPTSSGLSRGQRRSQQRSSRD
RKGSAADAKLKKKLASLEETETKTKTGCTKQKPAQTKRKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggtgactggggagaacagaaacagacaatgtctccaggagcccttcgtccgctctctg
tcctcctatcacttccacggctccagcagcccgtttgaccgcaggatcacctgtttggag
tggcaccccacccaccccaccaccctggctgcagccaccaaaggtggagacatcttaatg
ttgaactacaccaaccccacgaaagaatccttctttcaagggaacggagcaggagactcg
attggagggatgaagttctgtcccacagatttttccaaagtctatttggcttctggggaa
ggcacgctcaccctgaagagctttgagggccacccatccactctgctgtccagaaccgga
gactgtgaccacgattaccacaacgtttgcttcaggttcagagacctgggaaaccaccaa
gtcagctgggtcctgttcggcagctgtcgaagccagcaacgggtccccgctggacagtgt
caactgacgggccagacggtgacggagcaccttgagggagaaccggctgcagtgcgcaca
ctcctccgccgactcaagggatgcttgggcgtgtttcaagccgaggcacaccacacaggt
tggatttttagtgataagctgcacagagccaaagtgacccacgcagagtttaacccwcgg
tacgactggttgctggcgacggcctcagtggaccacacagtgaagctctgggacctgagg
aacctcaaagacaagaaaagcttcctttacgaattacctcacgagaaagctgtcaactca
gcctatttcaatccgtcggactgctccaagctgctcaccacagatcagaacgaccagatc
cgtgtttacgcttcctgtgactggaccaagcctcagcagatcattcagcacccacacaga
cagtttcagcacctcacacccatcaaagccacgtggcatcccatatatgacctgattgtg
gctgggcgctaccctgatgaccggatctgcactggcgatgagaaaaccatcgacatcttt
gactccaacagtggcgagctcgtgttccagttgtacgatccmgtcgcctcagggatcaaa
tctgtcaataaattcagtccaaggggtgatgtgattggatctggcatgggcgtcacgctg
ctgctctgggaccacgacgagtcgctgctcggcgatgggcaaaaaccgcaggaagaaatg
ccgacttcgtccggtttgtcgcggggccagaggaggagtcagcagcgctccagcagagac
cgcaaaggttcagctgcggatgcaaagctcaagaagaaactcgcttctctggaagagact
gagaccaaaaccaagactgggtgcactaaacaaaaaccagctcagaccaagaggaagaag
taa
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