Austrofundulus limnaeus (annual killifish): 106534751
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Entry
106534751 CDS
T06063
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106534751 (arid5b)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Helix-turn-helix
ARID
106534751 (arid5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
DUF789
Motif
Other DBs
NCBI-GeneID:
106534751
NCBI-ProteinID:
XP_013886981
UniProt:
A0A2I4D417
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MEPNSPKWVGSSCGLHGPYIFYKAFKFHQGAKPRILALGDFFFVRCKPEDPVCIAELQLL
WEERTSRQLLSSSKLYFLPEDTPQGRAAAHHGEHEVIAVSEKVIVRLADLVKWTVPDFSG
WDNGLKVEPLKPSVLRELGTNGRREALHRYRESTLTSGLNFKDVQRERAQLGQEEDGRKV
LVLSYPQYCRYRSVLARLREQPSSLLIDHTVLALGGIAALGGSSRILYCRDTFEHPTLLQ
NESICDEFAPNLKGRPRKKKLSISQRRDSQGQAPGQGSSGSSQGPTAVAAQDPSSPESKT
TTKVKPSYKTIPNGKITTSARQKPAGLSKKSSTEEKERGKEKEEKSEKKEEKNDEETSEE
SRAEEQAFLVTLYKYMKERDTPIERIPFLGFKQINLWTMFQAAQKLGGYELITVRRQWKH
VYDELGGNPSSTSAATCTRRHYERLLLPYERHLKGEQDMPLPLTKPRKQESSQEKASAAG
AKTKAAGVKKLKGPKPGSKKDKGEXRREQTQDSKGKEVSNELSIAVKKEASLQDEPIVIE
EQELHVTLKKEESLAAEQPSALDFRAPHGDFSLHTGPAPQPEWRQISEALKAKFVGEQQT
EGRFIPKNPYLPHCWDQSKPAGHIALPEHFSKVKDSIENHGGRVGKVLPMCKQPDEQCID
LSTDSFPEKEDFGVIKKESXQGVGQTAAYCKASQGVMSPLAKKKLLSQVCDTNHYSFSLQ
SPLPTATPSLPVLSVSERDQEKRRSDEEAARQKRNGLLDGVPEVAPIFRPSVIQHAQSSK
AHQQSTGGPSERSSAGDSSDTFSCRASRPLQPQASVPWQPYLPRTQTQDGVEATEEKLLQ
GPAAQSRSYAGDCYSSPHLHSLYRQTESCLSQERMAGFSSGERREHYSRECEGSQSFACG
GLEQEGLAYRSHFSDRTQTHGENGQAEDEPRDFTVSKPLSQRVSSFSKTPFCGLSYPIMH
HGLDSHPKACRVPPMTISPPKQSSSESSQPFSSPKSSGELPLGSSVRPSKRSLVEPESES
PPERKVRVVTPIHPASTIRRSDPEELKPAEPALAIHLNNHLPEGHPTTSFPLPHAAPLYA
GIYPHGTLVSPSAQDGFQQHPGLQYLKSQSAVSPLVPSFALQSMILHRHLYPSSPHPFYR
QPGGAPLCGDLLPHLYPLSPLPPPQLSSVHPSTRL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaactcaccgaagtgggtgggctcgtcttgcggcttacacggaccatatatc
ttctataaagcctttaaatttcaccagggcgctaagcccaggatcctggctctcggtgac
tttttcttcgtccgatgcaaacctgaggaccccgtgtgcatagcggagctccagctgctc
tgggaggagaggacgagcaggcaacttttatccagctccaaactttatttcctacccgag
gatactccccagggacgcgcagcggctcatcatggagagcacgaggtaatcgcagtatca
gaaaaagtgatcgtgcggctggcggacctggtgaagtggacggtaccagacttctcagga
tgggacaacggtctgaaggtggagcccctcaaaccctccgtgctccgggagctgggtacc
aacgggaggcgcgaggccctccaccgctaccgggagagcaccctgaccagcggactcaac
ttcaaggatgtgcagagggagcgggcacagctaggccaagaggaggacggacggaaggtt
ttggtcctcagttacccgcagtactgccgctaccgctcggttctggcccggctccgggag
cagccgtcctcgctgctcatcgaccacacggtgctggcgctgggcggcatcgctgcgttg
ggtggcagctcgaggatcctgtactgccgtgacaccttcgagcaccccaccctgctgcag
aatgagagcatctgtgacgagttcgctcctaacttgaagggacgacctcgaaaaaagaag
ctgtccatctctcagaggagggactcccagggtcaggctccgggtcaaggctcttcaggg
tcgagccagggtccaacagctgtagcagctcaggacccctcaagtccagagagtaaaact
acaaccaaggttaagcccagctataaaacgatacctaacggaaaaataaccacgtccgcc
agacaaaagcccgccggcctcagcaagaaatcctcgaccgaggaaaaggagcgaggaaag
gagaaggaggagaaaagcgagaagaaggaggagaagaacgacgaggaaacatcagaggag
agccgagcggaggagcaggctttcttagtcactctctacaagtacatgaaagagcgagac
acgcccatagagaggatccccttcctcggcttcaaacagatcaacctttggaccatgttt
caagctgctcagaaactcggaggatatgagttgatcacagtgcgcagacagtggaaacat
gtttatgatgaattgggtggcaaccccagcagcacaagtgccgccacctgtacacggaga
cactatgagaggctcctccttccttacgagaggcaccttaaaggcgagcaggacatgccc
ctccccctgaccaaacccaggaagcaggagagcagccaagagaaggcatctgcagctgga
gccaaaacaaaagcggctggggttaagaaactgaaaggccccaagccagggagtaaaaag
gacaaaggggaaaygagacgagaacaaacacaggactcaaaggggaaagaagtgagtaat
gagctctccatagctgtgaaaaaggaggcgtctctccaagatgaaccgattgtaatygag
gagcaagagttacatgttaccctgaagaaggaggagtcgttggcagcggagcagccgtcc
gcactcgacttcagagccccgcacggtgatttctccctccacacggggcctgctcctcaa
cccgagtggaggcaaatcagcgaggccctcaaagccaaattcgtcggcgaacagcaaacc
gaagggcgtttcattccgaaaaacccttatctgcctcactgctgggatcagagcaaacct
gccggacacatcgctctgccggagcacttctctaaggtcaaagactccattgaaaatcac
ggcgggagagtgggcaaggtgctgcccatgtgtaagcagccggacgaacagtgtatagac
ctgagcacagattccttcccagagaaagaggactttggtgtcattaagaaggagtccrcc
cagggcgttggacagaccgctgcctactgcaaagccagccagggggtcatgtctcctttg
gccaaaaagaagctcctctcccaagtgtgcgataccaaccattactctttctcacttcag
tcccctctgcccacagccacaccctccctcccggtcctatcggtttcagaacgcgatcaa
gagaagagaagaagcgacgaggaggcggcgagacagaaacgtaacggtttgttggacggc
gtccccgaggtggcacccatattcaggccttcggtcatccagcacgcccagagcagcaag
gcccaccagcaaagcaccggcggaccgtcggagaggagctccgccggggactcgtcggac
acgttcagctgccgggcaagccgtccccttcagcctcaagccagcgtgccgtggcagccg
taccttccgcgaactcaaacccaagacggcgtggaagccaccgaggagaagttactccaa
ggcccggcggctcagtccaggagctacgcaggcgactgctactcctcccctcacctccac
agtttgtacagacaaaccgagagctgcctgagccaagagaggatggccggcttcagcagt
ggagagcggagggagcactacagcagggagtgcgagggcagccagagcttcgcctgtggc
ggcctggagcaggagggcttggcctacaggtctcacttcagtgacaggactcaaacacac
ggagagaacggacaggccgaggacgagcccagagacttcaccgtttcaaaacctctctcg
cagagggtttcctccttctccaagacccccttctgtggtctctcctatcccatcatgcac
cacggtttggattcccatcctaaagcgtgcagagttcccccaatgacaatctccccgccc
aaacagagctcctccgagtcgtcacagccattttccagccccaaatcttcaggtgaattg
cccctcggtagttctgttcgacccagtaagcggagcctggtggagcccgagagcgaaagc
cctccagagcggaaagtgcgcgtggtgacacctatccacccggccagcaccatccgacgc
agcgacccggaggagctgaaacccgcggagccggccctcgccattcacctcaacaatcac
ctaccagagggccaccctacgacctccttccccctgccccacgccgcacccctctacgct
ggcatttacccacacggtaccttggtgtcgcccagcgcccaggatggattccagcagcat
cccggactgcagtacttgaaaagccagtcggccgtgtctcccctcgtgccctcgttcgcc
ctccaatccatgatcctccacaggcacctgtacccctccagcccgcaccccttctacaga
cagccgggcggggcgcccttatgcggagacctgttgccccacctctaccctctctccccc
ctccccccacctcagctgtcgtcggtacaccccagcaccagactgtga
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