Austrofundulus limnaeus (annual killifish): 106534807
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Entry
106534807 CDS
T06063
Symbol
ddx3x
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106534807 (ddx3x)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106534807 (ddx3x)
03041 Spliceosome [BR:
alim03041
]
106534807 (ddx3x)
03036 Chromosome and associated proteins [BR:
alim03036
]
106534807 (ddx3x)
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106534807 (ddx3x)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106534807 (ddx3x)
mRNA cycle factors
Common to processing body (P body) and stress granule
106534807 (ddx3x)
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106534807 (ddx3x)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106534807 (ddx3x)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106534807
NCBI-ProteinID:
XP_013887023
UniProt:
A0A2I4D446
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MSHVVVDNQHGLDQQLAALDLNGADGQGGGTGRRYIPPHLRNKDAAKNAGNTFCAGRQCC
YSVAPVNLYSPGWDGGRTNGYVNGFHDNRTNSGFXGRGPPRNDRGFGGYENKDGGWGGAP
RDAAYNSFGGRNDRTKSAFFNDRGAGSRGRYERGGFAGGGNSRWVEDYREEDWSKPTAPN
ERLEHELFSGSNTGINFEKYDDIPVEATGTNSPPHIESFHDVDMGEIIMGNITLSRYTRP
TPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGDALQASKNSGQDNGR
YGRRKQYPLSLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHL
LVATPGRLVDMMERGKIGLDHCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGIRQTM
MFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATG
KDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGQCPILVATA
VAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDI
LVEAKQEVPTWLESLAYEHQHKSSTRGRSKRFSGGFGARDYRQTPGGSGGFSSNRGGRSA
GGNRGFGGGGFGGNFYSNDGYGGNYSHSGSVDWWGN
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtcgtcgtcgataatcaacacggtctagatcagcagcttgctgccctagac
ttgaacggtgctgacggacaaggaggaggaactggcagacgttacattccacctcacctg
aggaacaaagatgctgccaaaaacgcaggaaatactttttgtgctggtaggcagtgctgt
tattcagtggctcctgtaaatctctattcacctggatgggacggcggacgtaccaatgga
tatgtgaatggttttcacgacaaccgcacaaatagtggctttgkagggcgtggaccccct
cgcaatgatagagggtttggtggttatgaaaacaaagatggcggatggggcggagctcct
agggatgctgcctacaacagcttcggaggacgcaatgatcggacgaagtctgcctttttt
aatgaccgtggagctggctcaagaggaaggtatgagcgtgggggctttgctggtggagga
aacagccgctgggtggaggactacagagaggaggactggtccaaacccactgctcccaat
gagcgtctggaacacgagcttttctctggaagcaacactgggataaactttgagaaatac
gatgatattcctgtggaggctacaggaaccaacagccctccacacattgagagtttccat
gatgtggacatgggggagattatcatgggcaacatcactctgagccgttacactcgtccc
actcccgtccagaagcatgctatccccatcatcaagtccaagagagacctgatggcctgt
gcccagactggctctggtaaaacagctgccttcctgctgcctgtgctgagtcagatctac
acagatggaccaggagatgctctgcaggcttcaaagaacagtggacaggacaatggcagg
tacggtcgtcgtaagcagtacccgctctccctggtcctggctccaaccagagaactggcc
ctgcagatctacgatgaggccaggaagtttgcctatcgctctcgtgtgcgtccttgtgtg
gtctatggtggtgctgatatcggccagcagatcagggacttggagaggggctgtcacctg
ctggtggccacaccaggccgtctggttgacatgatggagaggggcaagatcggtctggac
cattgcaattacctggtcctggacgaggctgaccgcatgttggacatgggcttcgagccc
cagatcagacggattgtggaacaagatacaatgccacccaaaggaattcgtcagaccatg
atgttcagtgccacgttccccaaagagattcagatcctggctcgggacttcctggaggac
tacatctttctggcagtaggccgtgttggctccacttcagaaaacatcacccagaaagtg
gtgtgggtagaggagaacgacaagaggtcctttctcctggacctgctcaacgccacaggc
aaagactctttgactttagtgtttgtggaaaccaagaagggagctgacgctctggaagac
ttcctgtaccgtgagggctacgcctgcaccagtatccatggagaccgatcacaaagagac
cgggaggaggcactgcatcagttccgctcgggccagtgcccaatcttagtggctacagct
gtggctgctcgaggtttggacatcagcaacgtgaaacatgtcattaactttgatctgccc
agtgacattgaggagtacgttcaccgtattggccgtacgggacgtgtgggcaaccttggt
ctggccacgtcgttctttaacgacaaaaacagcaacataaccaaagatttgctggacatc
ctggttgaggccaaacaggaagttcctacctggctggagagcctggcctacgagcaccaa
cacaagagcagcacccgaggacgctccaagaggttctcagggggctttggagccagagac
taccgtcagacaccaggtggttctggaggcttcagcagcaatcgtggaggccgcagtgct
ggagggaaccgtggctttggtggaggtggcttcgggggcaacttctacagcaatgatggc
tacggaggaaactacagccactctggtagtgtggactggtgggggaactag
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integrated database retrieval system
