Austrofundulus limnaeus (annual killifish): 106534879
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Entry
106534879 CDS
T06063
Name
(RefSeq) POU domain, class 6, transcription factor 1-like isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106534879
Transcription factors [BR:
alim03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106534879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106534879
NCBI-ProteinID:
XP_013887108
UniProt:
A0A2I4D4C8
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MNSQDLPAKDAPLTVNEQVIVMSGHETIRVLEVEVDASLPLSAPDGKSEHKAEEGSAQPT
DRAEASSPVVPQSSGEAGTAEQQXVSVDALAPAVQTLAPAIPVSVSLPPPQXAMPITVQG
CPQVLTQEGLATLMTGMMAQTGSLGQPLLIPLNMAGSIGGQGGLAVLTLPTTSVATLPGL
TAANPAGNLLKLPFAGLQAATVLSSVQPQLQTSAPTVFQPQTASLQPLQSAVQHVPPQQT
QVTGAQAPSAAPTISQSNISLAALQTAGLSINPAIINAASLGAQPQFLSSLTSTPIISSA
MSSMAGITSQIITNAQGQVIGTLPLLVNPASLAGGAATPTLPLQGLQVQTVTPQLLLNTQ
GQIIAAVGNGPAAVVTSAAVLPKTSSPPTLNKTNTQPSVTTVTQSPVVIAPQPSVLKSPT
TLSPTAPITCGDIAKVGQLVSKPQQTVSSEEGINLEEIREFAKNFKIRRLSLGLTQTQVG
QALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLAEAEHWNQKGQQNLMEFVGG
EPSKKRKRRTSFTPQAIEVLNSYFEKNALPTGQEITEIARELNYDREVVRVWFCNRRQTL
KNTSKINVFQV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccaggaccttcctgccaaagatgccccactcactgtcaacgagcaggtcatt
gtcatgtctggccatgaaacaatccgggtactagaagtagaggtggatgcctctctgccg
ttgtcagcccccgatggaaagagcgagcacaaggccgaggaggggtcggctcagcccaca
gacagagctgaggccagcagccccgtggtgccacagagctcgggggaagcagggacggct
gagcagcagktggtgtctgtagacgctctggctcctgctgtccaaacgctggctcccgcc
atacccgtcagcgtgtccctgcctccgccgcagrccgccatgcccatcaccgtccagggc
tgcccccaggtgctgacgcaggaaggtctggccactctgatgacgggtatgatggctcag
acggggtcactgggtcagcctctgctcatccccctcaacatggctggttctattggtggc
cagggcggcttagccgttctcactctcccaaccactagtgttgcaactcttcctggtctc
accgcagccaacccggctggaaacctcctcaaactgccctttgccggccttcaagctgcg
acggtcctgagttcagtccagcctcagctgcagacgagcgcgccgacagttttccagcct
caaacggcctccttacagccgctgcagagcgctgtgcagcacgtgccccctcaacaaaca
caggtcaccggcgctcaggcgccctctgccgcccccaccatctctcagtctaacatatct
ttggcggcgcttcagaccgcgggactgtccatcaaccccgccatcattaacgctgcttct
ttgggtgcgcagcctcagtttctcagttctctgacctccacgcccatcatcagcagcgcc
atgtccagcatggcgggcatcaccagccagatcatcaccaacgcccaaggacaggtcata
ggaactctcccattgttagtgaacccagcctctctggccggaggggctgcgactcccact
ctgcccctccagggtctccaggtccagaccgtcaccccgcagctgctcctcaacacgcag
ggtcaaatcattgctgccgtggggaacggacctgctgctgtcgtaacttctgcagcmgtt
ctgccgaaaaccagctctcctccgacactgaacaaaacaaacacacagccctcagtgaca
acagtaactcagtcaccagtcgtcatcgcaccacagccatctgtgctgaagagcccgacc
acactctccccaacagctcctatcacctgtggagacatcgcaaaagtgggccagctcgtt
agcaaaccccagcagacagtcagcagtgaggaaggcattaatttggaagaaatccgagag
tttgccaagaattttaagatccgacggctgtccttgggtctcactcagacacaagtaggg
caggcgctcacagcaacagagggtccggcttacagccagtctgccatctgcaggtttgaa
aagctggacatcacccctaagagcgctcagaagctgaagcccgtgttggagaagtggctg
gccgaggctgagcactggaaccagaaaggccagcagaatctgatggagttcgtcggaggc
gagccatccaaaaagcgcaagcggcgcaccagcttcacgccgcaggccatcgaagtgctg
aactcctactttgagaagaacgccttacccacgggccaggagatcacagagatcgccaga
gaactgaactacgacagggaggttgtacgagtgtggttctgcaaccgacgacagacgctg
aaaaacaccagcaagatcaatgtcttccaggtttaa
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