Austrofundulus limnaeus (annual killifish): 106534928
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Entry
106534928 CDS
T06063
Symbol
strbp
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106534928 (strbp)
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106534928 (strbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
106534928
NCBI-ProteinID:
XP_013887185
UniProt:
A0A2I4D4M1
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MRSFRSFSNDDRHVMAKHSTIYPSSQELEAVQTLVSTVECALKHVSDWLDQTSGTAHNNF
DSQAADRPEEDGPGDEPSEGAEESGGCYRDASIGGVLCGVIRVGLVAKGLLIKGDMDLEL
VLMCRDKPTQTLLDTVCCNLPAQIQKQTEEKYEVTSSLPEAAILVQTTAEPKLTLKITLT
SPEMREDEDQEEEDEEEEEQLETGEETEEVEEEXMGEEEQEQGKENGQVLGAAAQRVEAE
EEGEVLDRHRCLLALAALRHAKWFQARVNGLKSCVIVLRILRDMCNRHPVWEPLKGWPLE
LICEKAIATCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEKEPTDTLANMTDQQAE
AITYAAQHALRLMAFGQIYKVLEMEPLPSNKPSQKYPWSDKEGLGLKRPYEDGMMDDKDL
IKKMKRNLRKVLDSKAIDSNQPMNALMRLNQIRPGLQYRLLSQSGPVHAPVFTMSVDLDG
TVYEASGSSKKTAKLHVAVKVLQAMGYPTGFDSDLDPMSSDEKSDSEGKSETSSHSSNNP
THSSDGSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESGGSHDKRFVMEVEVD
GQKFRGAGPNKKVAKASAALAALEKLFSGPNAAAIKKKKILPQTKSALAAAAAASAVAAQ
VARGRGRAALARGTFVSAAAPGYVTPGFSTPYGYSPAAAAAPAYGGLFIDNPFYQPRTIA
PFIIHLGPQDLFTDF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctttcgttccttcagcaacgatgaccgccacgtcatggcgaagcactccacc
atctacccctcctcgcaggagctggaggccgtgcagacgctggtatccacggttgagtgc
gctctcaaacacgtctctgattggctggatcagaccagcggtactgcccacaacaacttc
gacagccaagcagcagacagaccagaggaggatggccctggtgatgagccaagtgaagga
gcggaagaatccggcggctgctacagggatgccagcatcggtggtgtgctttgtggagtg
atacgggttggacttgtggccaaaggactcctgatcaaaggtgacatggacctggagctg
gtgctgatgtgcagagacaaacccacacagacactgctggacacwgtctgttgcaattta
cccgcacagatccagaagcagacggaggagaaatacgaggtcacaagctccttgccagaa
gcagccatcctggtacaaacracagcagagcccaaactcacactgaagattaccctcacc
tcgccagaaatgagagaagacgaagatcaagaagaggaggatgaggaggaagaagagcag
ctggagactggggaggaaacggaagaggtagaggaggagycgatgggggaagaagagcag
gagcaggggaaagaaaatggtcaagtgttgggtgctgctgcgcagagagtggaggctgag
gaggagggggaggtgctggatagacacagatgtctgttggccctggcagcgctgcgacac
gccaaatggtttcaggctcgggtgaacggactgaagtcctgtgtcatcgttctcaggata
cttagagacatgtgcaatagacaccccgtttgggagcctctcaagggatggccattagaa
ctcatatgtgagaaggccattgctacctgtaacagacccctcggggcaggagaagccctc
cgtcgagtcatggagtgtttggcctcaggcattcttctcccaggtggtccaggtttacat
gacccctgtgagaaagagcctacagatactctggccaacatgaccgaccagcaggctgag
gctatcacctatgcagcacagcatgctctcagactcatggcatttgggcagatctacaag
gtgttagagatggagcctcttccctcaaataaaccgtcgcagaaatacccgtggtcggat
aaagaaggtttaggcctgaagaggccgtacgaggatgggatgatggatgacaaagacctc
attaaaaaaatgaagagaaatcttagaaaagtcctcgacagtaaagccatagactccaac
cagccaatgaacgccctgatgcgtctgaaccagatccgaccagggctgcagtatcgcctg
ctctcccagtctgggccagtacacgctccagtcttcaccatgtctgtggacctggatgga
actgtttatgaagcatctggatcctccaagaagacagccaagctccacgttgctgtcaaa
gttctccaggcgatgggatacccgacaggtttcgactcagatctggaccccatgagctca
gatgagaagtcggacagcgaggggaaaagcgagacgtcttcacactctagcaataaccca
actcattcctcagatggttcaaacacgctggaggtgcgaactcagggccccatactgacg
gcgagtgggaagaatcctgtcatggagctgaacgagaagcgacgaggcctcaagtacgag
ctcatctccgagagcggaggcagccacgacaaacgctttgtcatggaggtggaggtcgat
gggcagaagtttcgtggggcaggccccaacaaaaaggtagcaaaggccagcgccgctcta
gcagctctggaaaaactcttctctggtcccaacgcagctgcaatcaagaagaaaaagatc
ctgcctcagactaaaagtgctctggctgcagcggcagcagcctcagcggtagcagcacag
gtagcaagaggaagaggacgagcagcactcgcaagaggaaccttcgtcagcgccgctgca
cctggatacgtcacaccaggcttcagtacaccgtacggctacagccctgctgcagcagct
gctcctgcatacggtggtctgttcattgacaatcctttttaccagccgcgcaccatcgct
ccttttatcatccatctgggtccgcaggatctcttcaccgacttctaa
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integrated database retrieval system
