Austrofundulus limnaeus (annual killifish): 106534979
Help
Entry
106534979 CDS
T06063
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106534979
Cell adhesion molecules [BR:
alim04515
]
Immunoglobulin superfamily
Other
106534979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
C1-set
Fn3_ROS1
Ig_6
C2-set_3
Interfer-bind
Receptor_2B4
Sp38
Ig_SEMA-3_4_7A
Fn3_Dep-1_3rd
Fn3_VIN3
ChitinaseA_N
Lit
Motif
Other DBs
NCBI-GeneID:
106534979
NCBI-ProteinID:
XP_013887268
UniProt:
A0A2I4D4U4
LinkDB
All DBs
Position
Unknown
AA seq
2043 aa
AA seq
DB search
SLSDFELTKLCLFAVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIVPGNRFSLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPSESSPAILDSFQAGEVYAG
QSIELPCAAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTITWYRNTEPIAANQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVN
PGEPFSLMCAAKGAPPPSITWTLDDEEVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRDG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLK
DGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIETKEFMSSLQISK
VTLKHNGNYTCLARNAAASVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGDGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVY
SIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMEVILQPMTSQSIRVTWRAPKKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRMTLHGVLKGYRVVFWSLFPDGE
WGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDLPGPPAGIK
AVPSSPNSVVVSWLPPLKPNGVIRKYTIYCSSPGSGQPAPSEYEANPEMLFYRITHLTRG
KQYHIWSAAVTTAGRGNISSKVTVEPAGKVPAKILSFGGTVTTPWMKEVRLPCSSVGEPT
PTIKWTKESEDSAVPVTADVQRQILSNGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNL
VVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSSER
SFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQPLLTHINSTHAGL
NLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTNQLFLSELREATWYELKMKACNSAG
CGNQTSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTLGVALLFIIRKKRKE
KRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGED
KAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPGTNPVSRKSIKSAH
SSRNRYSSQWTLSRPCQSQSTASARTLTSDWRTMGSHGITATESDSYSASLSQDTDKGRN
SMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQMTTGTNDPAESMT
SLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPLYMKADPFFRKQGD
LHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPSKQQALTLGHSGLGSLGASSGTATLP
QRTLTMPSSSNTATASTSSTSSNPTNSNKVGGSRDSLLESSSSALGRLQKQSVGAYSKSY
TLV
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
tcactgtcggactttgagctgacaaagttgtgtctgtttgcagtacacagtgaggatgtg
ggctctaccaggctgtactttgtgaacgcctctctgcagagggtcacctactccagctcc
gtgggggtgtccctgccctgtcctgcggggggcacccccagtgccatactgcgctggtac
ctggccaccggcgacgacatctacgacgtgccacacatccgccacgtgcacgccaatggc
accctccagctgtaccccttctcgccctcggcctacaacagctacatccacgacaacgac
tacttctgcacggccgagaaccaggccggcaagatccgcagccccaacatccgcatcaaa
gctgttttcagggagccctacactgtgcgggtggcggaccagcgctcaatgcggggcaac
gtagcagtgttcaagtgcctcattcctgctgctgtccaggagtacgtkagcgtcgtgtcc
tgggaaagagacaccgtttccatcgttccaggtaaccggttctccctgacctcctttggg
gctctttacatctctgatgtccagaaggaggacgccctgtccacgtaccgctgcatcacc
aagcataagtacagcggtgagacacgacaaagcaacggggccaggctgtcagtcatggac
cccagtgagtcctcgcccgccatcttggacagtttccaagcaggagaggtgtatgcaggc
cagagcattgagctcccctgcgcagcgggcggataccccagccccaccgtgcgctggctg
aaagacggccggccgctgccctcggacgctcgctggacacggcgcctgacgggactgacc
atcagcgacctyaggcaggaggacagcggcagctacgcctgtgaggtcaccaacagcttc
ggctcaaaggaagtgtctggacagcttcacgttatagatccactgcgggtgaccttgtct
cctaagaatctgaaaacaggcatcagcagcacactgttcttcacctgcactgtggagggc
tctcctgaatacaccatcacctggtacaggaacacagagcctattgccgctaatcagcac
atctccattcaggggcaacacaacgacaccctgcagatcacagcggcgcaaaagttccac
tctggggcctaccagtgctttgcttcccggaagggccacactgctcaggacttttccatt
attttgttagaggatggtactcctcgtattgtgtcttccttcagcgagcgggtggtgaac
cccggcgaacctttctccctaatgtgtgctgcaaaaggagctccgcccccttccatcacc
tggacyctggacgacgaggaagtcgtacgagactccacctacaagaccagccagtacacc
ctgtcggacggcctcaccgtgtctcacgtcaacgtcagcagtccgctcattcgagatggg
ggagtgtatcgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggtccacctcgaattagacccatgcgagacatcacagcagtggcgggcaga
aacacgtatataacatgccgtgtgatcgggtacccctattactccatcaagtggctgaag
gacggcatgcagctgcctgataatcatcgacaagtggtgtttgagaacggcaccctgagg
ctgacggacgtgcagaagggcgccgacgaggggacctacttgtgtagcgttttaatccaa
ccccaggtgtcaataaaccagactgttcatgtcaccgtcaaagtgccgccgctcatccag
cccttcgacatcccctctacctcagtggggaagctcatgtacatcgcctgcgtggtgtcg
tccggcgacatgcccatacgcatcacctggcacaaagacggccagctcatcgtgccaggc
tcggcctctggcgtcgcgatcgagaccaaagagttcatgagctccctgcagatctccaag
gtgacgctgaagcacaacggaaactacacctgcctcgccagaaacgccgctgccagcgtc
agctgggagagacagctgattgtcactgtgccgccacgctttgtggtgcagcccaacaac
caggactgcatatacgggaaagctggagttctgaactgctcagtggagggttacccacct
ccaaaggtcatgtggaaacatgccaaaggtgttggaaacccacagcaataccatccagtc
ccgcttacaggccgcatccagatcatgtcaaatggctctctgctgatccggcatgtcctc
gaggacgaccgagggtactacctctgtcaggcctccaatggcgtgggctcagacatcagt
aaaagcatgatcctcactgtcaagattcctgccatgatcaccagtcaccccaacaccacc
atggccaggaagggccagaccaaggagctgaactgcacagcgcgaggcgagcagcccatt
atcatccgctgggagagaggagacacagtcatcgatgcggagaggaacccccggtactcc
atcacaatcaacaagaagggggatgaagtcatctccaccctgaagctgaacccagccgag
cgaggagactcagtcttcttctcctgtcacgccatcaactcctatggagayggtcgaggt
ctcatccaactcacagtgcaagaacctccagatccccctgagctggaagtgagggaggtg
aaggacaggagcatgaacctgcgctggatccaaaggtttgatggcaacagcatcattacc
agttatgacattgagtacaagaacaaatcagactcctgggatcacatgtacacaaccaga
aacatctctccaaccaacaatcaggccaacatcgtggagcttcacccagcctgcgtctac
agcatccgcatgtactcctacaataaaattggccgcagcctccccagcaaagagctcaca
atcagtacagaggaagcaccacctgacggacctccaatggaagtaatcctccagccaatg
acgtctcagagcatccgagttacatggagggctcctaagaaggagctgcagaacggggtg
atccgaggctatcagatcggctacagggagaacggtccgggcagcaacggccagtacagc
atcgtggagatgaaagccacgggggacagtgaagtgtacacgctggacaacctgaagaag
ttcgctcagtacggggtcgttgtccaggccttcaacagggctgggaccggcccatccagc
accgagatcaacgccaccaccctggaagatgtgccgagtgagcctccacagaacgtgcga
gccatctcggtgacgtcggatgaggcggtgatcacgtgggcggagcctccacgcatgacg
ctgcacggtgtgctgaaaggctaccgggtggtgttttggtccctcttccctgacggagaa
tggggtgagatgcagaacatcaccaccacacgtgagcaggtggagctgcgaggcctcgag
aagttcaccaactacagcgtccaggtcctggcctacactcaggctggggacggggtccgc
agcaacgttttgtacatccaaacccgcgaggatcttcctggtccgccagctggcatcaag
gctgttccttcctctccgaacagcgtggttgtgtcctggttacctcctctcaaaccaaat
ggtgttatccgcaagtacaccatctactgctccagtccggggtctggacagccggcgccc
agcgagtacgaggccaacccggagatgctcttctatcgcatcacgcacctcacccgtggc
aaacagtaccacatttggtccgcggccgtgacgaccgccggccgaggcaacatcagctca
aaggtcaccgtggagcctgctgggaaagtgccagctaagatcctgtcgtttgggggcacg
gttaccaccccatggatgaaggaagtgcgtctgccctgcagctcggtgggggagcccacc
cccacaattaaatggaccaaagaaagcgaggactctgccgtccccgtgacagccgacgtc
cagaggcagatcttatccaacggcacgctggtgctgcgctcagtcaaagcagaggattct
gggtactacacctgcacagcgacgaacacgttgggcttcgacaccatcatagtcaacctg
gtggtgcaggttcctcctgaccagcctcgtctgaccgtttccaccacctccacctcctcc
atcaccctggcttggatccctggagacaacggagggagctccatccgaggatttgtgctg
cagtattctgtggacaacaccgaggagtggagagatgtgttcatcagctccagtgaacgt
tccttcaggctggacaatctccgctgtggaacatggtacaaagtcaagttggccgctaag
aacagcgtgggttcaggacgcatcagtgagatcatcgaggcaaagacgcacgggagagaa
ccagttttcaacaaggaccagccgctgctcacccacatcaactccactcacgcaggactc
aacctacagggctggaccagcggcggatgccccatcactgacctcatgctggacttcagg
cccaaaggcacctgggcctggcagagcctcaaggccaactccaccaatcagctgttcctc
agcgagttacgcgaggccacrtggtacgaactcaaaatgaaggcgtgcaacagcgccggc
tgtggaaatcagacctcccagtttgctacaactgactatgacggcagtacaatccctccg
attaaatcagctcgtggagagggtgatgatgtgaaaaaactgttttctattggctctcca
gtcatcctggtcactctaggcgtggctttgctttttattatccgcaagaaacgcaaagag
aagaggcttaaacgactcagagatgcaaaaagcctggctgagatgctgatcagcaagaac
aaccgcagcatagacacacctgtgaagggccctcctcaaggtccgaggctccacatcgac
atccctcgtgttcagctcctcatcgaggacaaggaaggcatcaagcagataggagaggac
aaagcggcggtgccagtgactgacaccgaattcagccaatcagtgaacccacagaacttc
tgcacaggagtgtctctgcatcaccaagctctcatccagaattcagggcctctgatcgac
atgtccgacatccgcccgggtacaaaccccgtgtccaggaagagcattaaatcagctcac
agctccaggaacagatactccagccaatggacgctgagcagaccgtgtcagagccagtcc
acggcctcggcacggaccctgacctcggactggaggaccatgggctctcatggcatcaca
gcaacggagagtgacagctacagcgccagcctctcccaagacacagataagggccgcaac
agcatggtgtcaacagagagcgcctcgtccacttacgaggagttggccagagcttacgag
cacgccaagctggaggagcacctgcagcacgccaagttcaccatcaccgagtgcttcatc
tccgacagctcctcrgaccaaatgaccacaggcaccaacgacccggcagaaagcatgacc
tccctcagcacgccgtctgaaccgggcatctgccgcttcaccgcatccccacccaaacca
caggactatgaccggggtaaaaatgtggctgtgcccattccccaccgtgctaacaaaagt
gaattctgcaatctaccgctctacatgaaggcagacccattcttccgtaagcaaggggac
ctgcatgacccgtgcccggctgtgccaccgcgggaagcctcgatccgcagcctgacgcag
cgggcgtatcacacccagggccgtcacaagactcttgacccttccaagcagcaggccctg
acgctgggccactccgggctgggcagcctgggcgcgagctcaggcaccgccaccctgccg
cagaggactctcaccatgcccagctccagcaacacggcgacagcttccacttccagcacg
agcagcaaccccaccaacagcaacaaggtggggggctccagagactcgctgctagagagc
agctcctccgctctggggagactgcagaaacagagcgtgggggcctactccaagtcgtac
acgttggtgtag
DBGET
integrated database retrieval system
