Austrofundulus limnaeus (annual killifish): 106535024
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Entry
106535024 CDS
T06063
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
alim03037
]
106535024 (pkd2)
04040 Ion channels [BR:
alim04040
]
106535024 (pkd2)
Cilium and associated proteins [BR:
alim03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106535024 (pkd2)
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106535024 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
Motif
Other DBs
NCBI-GeneID:
106535024
NCBI-ProteinID:
XP_013887335
UniProt:
A0A2I4D511
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MSSSRVRPQQQPQSQPRKLDPSEGIEMESIQHQDLGLGGVIGTPSPPSRQAWSRDNPGFE
PEEEIMEADWPSASPVRRAVSAASRGSCSSGLGGSFSREQMPRGGLYPTPTPTLNAQQQD
GHEHLGCMKQILQKIRVLWGTDLMEDSDSSRERYLRNILREMLTYFAFLITICVLTYGMV
NANMYYYTKVMSQLFLDTPLSPGDPITFRSLSTMEDFWKFTQGPFLNGMYWEVWYNNKSL
PENQSLIYYENLLLGVPRLRQVKVRNESCSIHKDLRDEVHDCFNIYTPSNEDTGSFGPKN
GTAWVYTRESGMNGSSFSGQVSTYGGGGYYQDLSRTKEESAAQLQFLKDHLWLDRGTRAV
FLDFSVYNGNINLFCIAKLLVEFPATGGVVTSWQFQTVRLIRYVSSWDYFVGVCEVAFCL
FILYYVVEEVLEIHIHRLHYFRSTWNCLDVLIVVLSVVAIIMNITRTAMARNLLNGLLEN
YAAHPSFEPLANLQVQFNNMAAVIVFFAWVKLFKFININKTMSQLTSTMSRCAKDLVGFA
IMFFIIFLAYAQLAYLVFGTQVNDFSTFQASVFTQFRIILGDFNYSEIEEANPVLGPIYF
STFVIFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGCNKALMKLRLKKTA
VDDISDSLRQAGGKQNFDELRQDLKGKGHSEAEIQAIFAKYDQDGEPELTEHEHQQMRDD
LEKEREDLELERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSYEEFQV
LVRRVDRMEHSIGSIVSKIDAVIVKLEGMERAKLKRRDVLGRLLDGVMEDERLGRDTDAH
REQTERLVREELELWESDDTVSQVSHAQTATPVGPRPRPPSSLSTDGLDTSANGGAHV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatctcgagtcagaccccagcagcagccgcagagccagccccgcaaactcgac
ccgagtgaggggatagagatggagagcatccagcaccaagacctgggcctcggaggggtc
ataggcaccccgtccccgccgtccaggcaagcgtggagccgggacaacccgggtttcgag
cccgaggaggagatcatggaggcggactggccctcggcgagtcccgtgaggagggcggta
tccgcggcctccaggggcagctgcagcagcggcctgggaggcagcttcagccgcgagcag
atgccccgtggaggactgtaccccaccccgaccccgaccctgaatgcccagcagcaagac
gggcacgagcacctcggctgtatgaagcagatcctccaaaaaatcagagttctgtggggc
acagatttgatggaggacagtgacagcagccgagaacggtacctcaggaacattttgaga
gagatgctcacgtatttcgcattcctcattactatttgtgttttgacctatgggatggtt
aatgccaacatgtactattacaccaaagttatgtctcagctgttcctcgacacgccactg
tctcctggggaccctattacttttaggagcctctccaccatggaggatttttggaagttc
actcaggggcccttccttaatggtatgtactgggaggtttggtacaacaacaagagcctg
ccagagaatcagagcctcatctactatgagaatctcctcctcggggtgccgaggctccgg
caggtcaaagtccgcaacgagtcctgctccatccacaaggatctgcgggatgaagtccat
gactgctttaacatttatactccaagcaacgaggacaccggctcttttggcccaaagaat
ggaacagcgtgggtgtacacccgggagagtgggatgaatggcagcagtttctcgggtcag
gtgtcgacgtatgggggtggcggatactaccaggacttgtctcgaacaaaagaggagtca
gccgctcaactgcagttcctcaaagatcacttgtggctggatcggggcacaagggccgtc
ttccttgacttctctgtgtacaatggaaacataaatcttttttgcattgccaagttattg
gtggagttccctgccactggtggggtggtgacctcctggcagtttcagacggtgcgtttg
atacgatacgtgtccagctgggactactttgtgggcgtgtgtgaagtggcgttctgcctg
ttcatcctttactatgtggtcgaagaagtgttggaaatccacatccaccggctgcattac
ttcaggagcacgtggaactgtctggatgttctcattgttgtgttgagtgttgttgccatt
atcatgaacataaccagaacagccatggccagaaatctgctcaatggcctgttagagaac
tacgctgctcaccccagctttgagccgttggccaacctgcaggtccagtttaacaacatg
gccgcagtgattgtcttttttgcctgggtcaagctgtttaagttcatcaacatcaacaaa
accatgagccagctgaccagcaccatgtcccgctgcgccaaggacctcgtggggtttgca
atcatgttcttcatcatcttcctggcgtacgctcagctcgcctacttggtgtttggaacg
caggtcaatgatttcagcactttccaagccagcgtatttacccagttccgaatcatcctg
ggagactttaactactctgagattgaggaggcaaatccggtgcttgggcctatttacttt
tcaacttttgtcatcttcattttctttattctcatgaacatgttcctggccatcatcaac
gacacctactctgaggtgaaggcggatatgtcgcaacagagatctgagatggaaatgact
gatctcatcaagaagggttgtaacaaagcgttgatgaagttaagactgaagaagacggct
gtagatgacatctctgacagtctgcggcaagcagggggaaaacaaaacttcgacgaactc
cgtcaggatctaaaaggaaagggccactcagaagcagagattcaggccatctttgcaaag
tacgaccaggacggcgagcccgagctgactgagcacgaacaccagcagatgagagatgac
ctggagaaagaaagagaggacttggagctggagcgcaattcgctgactcgacccagcagt
gggcggagcttccctcgcacccaggacgactcggaggaggacgacgacgaggactccggt
cacagctcacgccgccgcggcagcagctcagggggcgtctcatatgaagagttccaagtg
ctggtgaggcgagtggacaggatggagcactccatcggcagcatcgtgtccaagatagac
gccgtgatcgtgaagctggagggaatggagagagctaaactgaagaggagagacgttctg
ggcaggctgctggatggagtcatggaggacgagcgtttaggacgggacacagatgcccac
agggagcagacggagagacttgtgagggaggaactggagctctgggagtcggacgatacg
gtctcgcaggtcagccacgctcagacggctacgcccgtcggcccgcggcctcgccctccc
tcctccctgtccaccgacggcctcgacacaagcgctaacgggggcgcccatgtgtaa
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