Austrofundulus limnaeus (annual killifish): 106535183
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Entry
106535183 CDS
T06063
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106535183 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106535183 (dis3l)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
106535183 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
POX
Motif
Other DBs
NCBI-GeneID:
106535183
NCBI-ProteinID:
XP_013887579
UniProt:
A0A2I4D5T6
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MIKTDKILHLKSCRGRKVRVVREHYVRERVPCFSARCQADCPNEGKVLSADVTHYVVPDV
EVVVNFLEVLEFRELQGIVFTQTACQALHSKGRRYSSRLRNLLKDPRHDCVLFANEFQTY
SYCPREKGESQEAWQTRCVYSAAVWYYNHLAGLINVVMITEDTDAVTQFSSLNSGVFVVS
FQDYLQNFWPDLHAAHELYSSIRQALQEKEAENSQREFPEHLPAEVLEAGIKSGRYIQGT
VHVSKHRAQNQALIVREGLSNKNPDLGAGVLXFGSKSRNRAVHGDLVAVELLPRDKWRGK
VTALTEGQGDEKTGEDSQSKAMPTGQVVGILQRNWRDYVVTFPSRDRTLSQSRNSQRILA
IPWDRRIPKIRLSTQQADALQNHRVVVRIDSWDSTSLYPNGHSVRVLGPAGDLETEIQTI
LTENCIHVPPFSEAQLRELPVNSPKKPWTVDPAQVAQRRDLRDTHLVFSVDPQGCEDVDD
ALSVRSLAGGQLLELGVHIADVTHFVPEGSLTDLEARSRATTYYLADRRYDMLPAVLSSD
LCSLLGGVDRYAMSVVWELDAQTLDVTQVWFGRTLIRSSYQLHYELAQALLNGEEAQVPE
LARLDPEERSVKLAELIEALETLTRVARHLRAQRDRGGALELEGVEVRAQLDEDRNITAL
VPRLPLEVHETVAECMIYANHWVARRIQEAFPHQALLRRHPPPRQEMFSQLVETAKAGGF
SIDTRTNKALAESLDRAVDLQDTLVNRLLRMMATRAMSQALYFCTGSESEDQFYHYGLAL
DRYTHFTSPIRRYADVVVHRLLSAALQAEEGAGLVKGNKDMQEVAEHINSRNRAAKRAQN
LSVGVFQCLFFKERDPQNDPRCVSDAIIYAIRDDGVLVFVPEYGVRAPVCXKNKDGQVVS
VGADGSCEWQSGSVRRYSDHISTSSSCGSATFRLFDHITVRISVLSTNCHADTLHLEVVR
NMPHLSAAPRQSCSQNQNHMVQEVVRLAEEAQEKATQEKPRLSKEEREFRQSRTPNLYSL
LQEVRELALMDLEVVSQTCATTT
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaccgataagattctgcacctgaagagctgccggggccggaaggttcgggtg
gttcgggagcattacgtcagggagcgggttccctgcttcagcgctcggtgtcaggcggac
tgtccgaacgagggaaaggttctgtctgctgatgtgacccactacgtggtgccagatgtg
gaggtggtggtcaacttcctggaggttctggagttcagggagctgcagggcatcgtcttc
acgcagaccgcctgccaggctctgcacagtaaaggacgcaggtactccagccgtctgagg
aacctgctgaaggaccctcgacacgactgtgtgctctttgctaacgagtttcagacgtat
tcatactgtccacgagagaaaggagagagccaggaggcgtggcagaccaggtgtgtgtac
tctgctgcagtctggtactacaaccacctggctggtctgatcaacgttgtgatgatcaca
gaagacacagacgccgtgacgcagttcagcagcttgaactctggagtgtttgtcgtctcg
tttcaggactatttgcagaacttctggccggaccttcatgcggctcatgagctctacagc
tccatccgtcaggcgctgcaggagaaggaggctgagaactcccagagggagtttccagaa
catcttcctgctgaagtcctggaggctggaatcaaatcaggacgctacattcaggggact
gtacatgtgagcaaacatcgagcacagaaccaagctcttatcgtcagagagggtttgtcc
aacaagaacccagatctgggtgcaggggtgctgstgtttggttctaagagccgtaacagg
gccgttcatggtgacctggtcgcagtggagctgctgccacgggacaaatggagggggaag
gtcacggctctgactgagggacagggggacgagaagacgggggaggacagccagagtaaa
gccatgcccacaggtcaggttgtggggatcctgcagaggaactggagggactacgtggtg
acgttcccctccagggacaggactctgtctcagagcaggaactcccaacggatcctggcc
ataccctgggacagacgcatcccaaagatccgtctgagcacccagcaggctgacgctctg
cagaaccacagggtggtggtgcgtatcgactcgtgggacagcacgtctctctatcctaac
ggccacagtgtgcgggtcctgggtccagccggagacctggagactgagatccagaccatc
ctgacagaraactgcatccacgtgcctccgttctccgaagctcagctcagagaactgccg
gtgaactctccaaagaagccgtggacggtggatccggctcaggtggcgcagcggcgcgac
ctcagggacactcacctggtgttcagcgtggacccgcagggctgcgaggacgtggatgac
gcgctrtcggtgcgcagcctcgcaggtgggcagctcctggagctgggggtccacatcgcc
gacgtcactcacttcgtcccggaggggtcgctgaccgacctggaggccaggagcagggcc
accacctactacctggctgaccgcaggtacgacatgcttccagctgtgctcagctctgac
ctgtgctcgctgctggggggcgtggacaggtatgccatgagcgtggtgtgggagctggac
gctcagaccctggacgtcacccaggtgtggttcggtcgcacgctgatccgctcctcctac
cagctgcactacgagctggcccaggcgctgctgaacggggaggaggcccaggtaccagag
ctggcccggctcgaccccgaggagaggagcgtcaagctggctgagctcatcgaggcgctg
gagacgctgacccgcgtggcgaggcacctgcgggctcagagggaccgaggaggagcgctg
gagctggagggggtggaggtgagagctcagctggacgaggacaggaacatcacggcgctg
gtccccaggctgcccctggaggtccacgagaccgtggcagagtgcatgatctacgccaac
cactgggtggcccgcaggatccaggaagcctttccacatcaggccctgctgaggcgccac
ccgcccccccgacaggaaatgttcagccagctggtggagacggccaaggcggggggcttc
agcatcgacaccaggactaacaaggccttagccgagtctttggaccgggcygtggacctc
caggacacgctggtgaaccggctgctcagaatgatggccacccgggccatgtcccaggcc
ctgtacttctgcactggttctgagtcygaggaccagttctatcactacggtctggctctg
gaccggtacacccacttcacatcaccgatccgtcgctacgccgacgtggtggttcaccgc
ctgctgagcgcggcgctgcaggctgaggagggggcggggcttgttaaaggcaataaggac
atgcaggaagtggctgagcacatcaacagcaggaacagggcagccaagagggcccagaac
ttgtccgtgggcgtgttccagtgcctcttcttcaaggagcgagaccctcagaatgaccca
cgctgcgtgtccgacgccatcatctacgccatccgagacgacggygtgctggtgttcgtc
cccgagtacggtgtgagggctccggtctgcktgaaaaacaaagacggccaggtggtgtcg
gtgggggccgacggcagctgcgagtggcagagcggctcggtccgccggtactcggaccac
atcagcaccagctccagctgcggcagcgccaccttcaggctgttcgatcacatcactgtt
cgtatctctgtcctctccaccaactgccacgcagacaccctgcacctggaggtggtccgc
aacatgccgcacctcagcgcagcgcctcgccagtcctgctcgcagaaccagaaccacatg
gtccaggaggtggtgcggctggccgaggaggcgcaggagaaggcgacgcaggagaaaccc
agactttccaaagaggagagggagttcaggcagagcaggacccccaacctgtactctctc
ctccaggaggtccgagagctggccctgatggacctggaggtggtctcacaaacctgtgca
acaacaacttag
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integrated database retrieval system
