Austrofundulus limnaeus (annual killifish): 106535200
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Entry
106535200 CDS
T06063
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
alim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106535200 (srrm1)
03015 mRNA surveillance pathway
106535200 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106535200 (srrm1)
03041 Spliceosome [BR:
alim03041
]
106535200 (srrm1)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106535200 (srrm1)
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
106535200 (srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
106535200
NCBI-ProteinID:
XP_013887601
UniProt:
A0A2I4D5S4
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLASQRKGDEDKKEKDTRERAQSKSPRRRKTRSPSPRRRSP
VKRERKRSPSRSPRRKPSPVAESSPPPPLLQSSTRVTQPLVEPDTSGKSPTEPVIQEASS
TEDAVVESAVADSVSEVKETSPEKPPKKEERPRSRERDLRREKPHHRSRSRSHSRPRRRR
SRSRSYSPRRRQSPRRRMSPRRRSPPRRGPTGSRHRHRRSPVRRRRSRSASPSGSSSSGS
RSPKKPVKRISTTPPRKQVHRLDTSISPAAKDKRSPSPRARRGRGSVSPPRSSEEDQNEK
GIAADSVQQRRQYRRQNQQSSSDSGSSSSEDEGPKRPNTGPGARNGEVRRRRSRTPSPRR
RHREASPRRRRSPSPGRRRRSPSPPRRRRSPSPPRRRSPSPPPRRRSLSPRRYSPPIQRR
YSPSPLPPQKRKISGSPTKRSSPGPKRRTSRSPKRRSSPPPRRRSPPSSSSPPRHRGSPI
LSSTRPSRDTRSPIAGARRLSPSPANRSHAVRRSTSPQGRFASSTMSPSNQRRQQSPSHS
SKLIRRVSRTPEPRNKRTSPSPKYMRRASSRSRSVSPQPAAQKRPAPASASPSPTRSASG
SPPPPVKKVNSGSGSQSPAKTSDVEGGGKKKKKKKEKKHKKEKKHKKHKKHKKEKNSSVT
ETQENRGAEEDGGSRKDSESEADDGLDDLEKHLREKALRSMRKAQMSPSQMS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacgagtgcggagcaagacaaccggttcagcaacaaa
cagaagaaactcctgaagcagctgaaattcgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctagaggtcatcaaaccatggattacccaacgtgtgacagagattctg
ggctttgaggatgatgtggtcatagagttcattttcaatcaacttgaagaaaagcaccct
gatagcaagatgatgcagatcaacctgacagggttcctgaatggaaagaatgcccgcgag
ttcatgaaagacctgtggcccctgcttttaagtgcccaagagaacattgctggcatcccc
tcagcgtttctggaacaaaagaaagaggaaatcmgacagagacagattgaacaagagaag
cttgcttcccagagaaaaggggatgaagataaaaaggaaaaggacaccagagagagggct
cagtcaaagagtcctagaaggcggaagacgagatcaccatcaccacggcgaagatcacct
gtaaagcgggaaaggaaacgtagcccatcgcgatctccaagacgcaaacccagtccagtt
gctgagagctcacctcctccacctttgctgcagtcttccacgagagttacacagccgctt
gtggaaccagatacgtccggaaaaagcccaacagaaccagtcattcaagaagcatcttct
actgaagatgcggttgtagagtcggcagttgcagactcagtctctgaggttaaagagacg
tccccagaaaaacctcccaagaaagaagaaagaccaagatctcgtgaacgagacctgagg
agagagaaacctcatcaccgttcccgctctcgttctcattcccgcccccgcagacgacgc
tcccgttcaaggtcttactcacctcgtagaagacaaagtcccagaaggagaatgtcacct
cgtcgaagaagtccccctaggcgtggccccactggttccagacacagacacaggcgttct
cctgtccgcaggagacgttctcgttctgcttcaccctctggcagcagctcctctggttcg
cgctcccctaaaaaacccgtgaagagaatttctaccacaccgcctcgaaarcaagtccat
cgtctggacacttccatcagccctgcggcaaaggacaaaaggtcaccgtctccacgagca
agaagaggcagaggctctgtttcccctcccaggtcatcagaggaggaccaaaatgaaaag
gggatagcagcggattcggtgcagcagcgacgtcagtatcgcagacagaatcaacagtct
tcttcagattcaggatcatcctcttcagaagatgaggggcccaagaggccaaacacaggt
cctggtgccagaaatggtgaagtcaggaggagacgtagccgtacrccctcacctcgtagg
cgacatagggaagcctccccaaggagaagacgatccccgtctcctggacgcaggcgtcgt
tcaccctctcccccacgacgacgcagatctccctctcctcctagacgcaggtctccttca
ccaccacctcgtcgtagatctttgtctcccagacgttattctccccctatccaacgtcgc
tacagcccctcacctttaccgccacagaaaaggaagatatcaggttctcccacaaaacgc
tcttctccaggtcccaaacgacgcacctctaggtctcctaaacgcagaagctctccccca
ccaagaagacgctctccgccttcttctagttctccacctagacacagggggagccccatc
ctgtcctcaaccaggccaagcagggatacacgatcccctattgcaggtgccaggcgtctc
tctccatcacctgcaaaccgcagccatgctgttaggcgatccactagtccccaggggcgc
tttgcttcctccactatgtctccatctaaccagaggagacaacagtccccttcacacagc
agtaagctcatccgcagggtgtctcgcactccagagccacgcaacaaaagaacctcacca
agccctaagtatatgaggagagcatcctccaggtccagatcagtttcccctcaaccagct
gctcagaaacgtccagcccctgcatctgcctccccatctcctactcgttctgccagtggt
tctcctccacccccagtcaaaaaagtcaatagtggttctggcagtcagtctccagctaag
acttcggatgttgaaggtggtggaaagaaaaagaagaagaagaaggaaaagaaacacaag
aaagagaaaaaacacaaaaagcacaagaagcataaaaaggaaaaaaacagcagcgtgact
gagactcaagagaaccggggtgcagaggaggacggtggatcaagaaaggattcagagagt
gaagctgacgatggtttggatgatctggaaaagcaccttcgagaaaaggccctgcgctca
atgaggaaggcccagatgtctccatcgcagatgtcatga
DBGET
integrated database retrieval system
