Austrofundulus limnaeus (annual killifish): 106535221
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Entry
106535221 CDS
T06063
Name
(RefSeq) protocadherin-17-like isoform X1
KO
K16499
protocadherin delta 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106535221
Cell adhesion molecules [BR:
alim04515
]
Cadherins
Protocadherins
106535221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
PepSY
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
106535221
NCBI-ProteinID:
XP_013887627
UniProt:
A0A2I4D5U9
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MHLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDAKLGLEQIGQGGQGKKANF
RVLENSAPHLIDVDPQSGLLYTKQRIDRETLCKRSPKCQLSMEVFANDKEICMIKIDIQD
INDNSPIFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK
SRGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD
QPSYVVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIK
IQGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA
APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREATDEYN
VTIVAKDNGLPPLNSTKSFTVKILDENDNIPRFTKAVYLLQIPENNIPGEYLGSVLAHDP
DLGQNGTVYYSIINSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLAKDAGS
PHLESNXTVRISVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES
GRLTYEISDGNEEHLFEIDSVTGEVRTAHPVWDDVSPIVELIIRVSDHGKPTLTAAARLI
IKASNGRPPDGLPHMKDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYN
CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR
LPLSSPRSEVMYLKPTANNLSVPQSHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEP
NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKXKAS
GVKPPPMEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGVDYRNNMFVPAGMEAVP
ETETYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASGSPTKG
CSVMPPCSSVKGPADGAEGRPPPASCSGHYGPPDGQYLSPTKQSRDQGVYPPLPPSDPVA
KVLAEARSRISKEAAGEMERVLEQAEPDSSRDGMDADQVVRDIDKLLQDCRESETTGTLR
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttctattttctttttcctcctcttgtgggctcaagccctgacattgaaaaac
ttgaattactctgtcccggaggagcagggtccaggaacggtgattgggaacatagccaaa
gatgccaagcttggactcgaacaaattgggcagggaggacagggaaagaaagccaacttc
agagtgctggagaactcggccccgcatctcatcgacgtggaccctcaaagcggacttctg
tacacaaagcagcgcatcgacagggaaacattgtgtaagagaagccccaagtgccagctc
tccatggaggtgtttgccaatgacaaggagatatgcatgataaaaatagacattcaggac
attaacgacaactcgcctatttttccttcagatcagattgatattgacatttctgaaaat
gcagtgccagggacacgttttcccttgaccagtgcacatgaccctgatgcaggggaaaat
ggcctgaaaacctatcaaataacccgcgatgactacaatctgttttccttggaggtaaaa
tccagaggggatgggaccaaattcccagaattagttattcaacggccactggaccgagaa
gaacgaagccatcacactcttattttgtcggccaccgatggtggagaatatcctagatca
gggactatgcagataaacgttaaagttattgattccaatgacaacagcccagtgtttgat
cagccatcatatgtcgtagaaatccctgaaaattctcctcctggaaaagtcttgattgat
ttaaatgccacagatcctgatgaaggaaacaatggtcaggtggtctactccttcagtggt
tatgccccagagagaatccgggagctgttctctatagactcaagaacaggggtgataaag
attcagggtgaaattgactatgaagagagcccagttattgagattgacgtccaggctaag
gatctaggtcccaatccaatcccaggccattgtaaagtcactgtgaaagtgcttgacagg
aatgataactggccatctataggctttgtgtctgtgagacagggagccatcagtgaagca
gcacccccaggcactgtcattgctctggttcgtgtcaccgacaaggactcaggcaggaat
gggcagcttcaatgcagagtgctgggtaatgtcccttttaaacttgaggagaactatgat
aacttctacacagtggtgacagataggcccctggacagagaggctacggatgagtacaat
gtcaccattgtagctaaagacaatggacttcctcctctgaactccacaaaatctttcaca
gtcaagattcttgatgagaacgacaacattcctcgcttcactaaggctgtctaccttctt
cagattcccgagaacaacatccctggggaataccttggctcagttttggcacatgaccca
gatcttggccagaacggcacagtatactacagcataatcaactccaatgtgagtgggggt
gatgtcaacacatatgttaatgtaaatgcagctaatggggccatttatgcagtcagatca
ttcaactacgaacaaataaagtattttgacttcaaagtccttgctaaagatgcaggatct
ccacacctggagagcaacyccacagtgcgcattagtgttctggatgtcaacgacaacatc
ccggtcatagttttaccgcttctccagaacgacaccgctgaaatccacgttccacggaat
gttggtgtcggctacatcgtcaccactgtgagggcggtggataacgactatggtgagagt
gggaggctcacctatgagatwtctgacggaaacgaggagcatctctttgagattgattcg
gtaactggggaagtcagaacagcccacccagtrtgggatgatgtaagtcccattgtggag
ctgatcattcgtgtttctgaccatggcaagccaactctaaccgccgccgcccgcctcatc
atcaaggcctcyaacgggcgtcctcctgatggactcccacacatgaaagacaatcagaac
tgggacatgtcmctgcctcttattgtgactctaagcatcatatctatcatgcttctggct
gccatggtgaccatagcgattaagtgcaagcgggaaaacaaggagatccgaacttataat
tgtcgcattgcagagtactcgcaccctcagctggggaaaggcaagaagaagaagattaac
aagaacgacatcatgctggtgcagagcgaagtggaggagcgggatgccatgaatgtgatg
aatgtggtaagcagcccctcactggccacctctcccatgtactttgactatcagacacgc
ctgccactaagctcaccaaggtcagaggtcatgtacctcaagcccactgccaataacctc
agcgtgccccaaagccacgtgggatgccacaccagcttcacaggcccagtcaccagcact
acagacacacctactaaccgcatgtccatcatacagacggacaatttccccactgagcct
aattatatgggcagcagacaacagtttgttcaaagtagttcaacgttcaaagacccggag
cgagcgagcctcagggacagcggccatggcgacagcgaccaggccgacagcgaccaggac
accaacaaaggctcctgttgtgatatgtcggcaaaagaagctctcaagrtaaaagcttca
ggtgtgaaaccaccacctatggagcaagatgaggattgtgtgaattgtacygaggagtgc
agagtactgggtcattccgaccgctgctggatgcctcagttccctgctggtgggaatcag
gcggagggcgtagactaccgcaacaacatgtttgtgccagccgggatggaggcggtaccc
gagacagagacttacgagaccgtcaatcccaacggcaagaaaacgttctgtacttttggc
aaagagaggcgcgaccacaccatcctggtcgccaacgtcaagccctacttgaaagcgaag
cgtgccctcagcccactgctccaggaggtcccctcggcctcgggcagccccaccaagggc
tgctccgtgatgcctccctgctcctcggtcaaaggcccggcygacggggccgaaggcaga
cctcctccggccagctgctccggccactacgggcctcccgacggccagtacctgtcgccc
accaaacagagcagagaccaaggggtctacccgcctttgcctccctcggacccggtggcc
aaggtgctrgcggaggcccggtccaggatcagtaaggaagcggcgggcgaaatggagcga
gtcctggagcaggcggagccggattccagccgcgacgggatggacgctgaccaggttgtg
agggacatcgacaaactcttacaggattgcagagagagcgagaccaccggcacgctcaga
aagtga
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