Austrofundulus limnaeus (annual killifish): 106535237
Help
Entry
106535237 CDS
T06063
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04518
Integrin signaling
alim04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
106535237
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106535237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106535237
Membrane trafficking [BR:
alim04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106535237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_9
SH3_1
RhoGEF67_u1
CH
PH
SOS1_NGEF_PH
RHG20_PH
DH_Alsin
ZapB
COG6_N
Motif
Other DBs
NCBI-GeneID:
106535237
NCBI-ProteinID:
XP_013887648
UniProt:
A0A2I4D5Y5
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MNPEEQTVTWLISSGVLSSPKKNIADPEEFLKTSLKDGVVLCKLTERFIPGFTPKYCQDP
RTEADCISNIKEFLRGCSSLKVEGFEPEWLYTGENFGKVLNTLLAVNFATQDCATERCPQ
SGSSSPNQATSSHTLSSIKSKGSLRRQSKSTEMSENCGGGQLMVKARFNFKQNNEDELSF
SKGDLILVTRQEEGGWWEGTLNGRTGWFPSNYVREVKSCEKPLSPKAQLTKNYYSVVVQD
ILEHEREFVKELQTVLTCYLQPLQASDKLSSADSTTLCGNLEDILTFQQGLCLALEECTK
VPESQQRVAACYLNLMNQIKNLYLTYCSSHPSAVSILTDHSDELEKFMESQGTSASGVLS
LTISLSKPFMRLDKYPTLLQELERHVEEAHPDYTDIVKATAAFKSLVTQCQDLRKRKNLE
LQILSEPVRGWEGDSMKSLGHVIYMSQVHVRSGCSEEKEERYLMLFSNVLVMLSASPRMS
GFIYQGKVLLTGTTLTRQVEDSDSAHYAFDITGSLIDRLTVFCSSPQELQEWLEHLQPFT
KGGSPAGTISKNVEGKLLSTVGVPSHPPHLGGISAVGRGPLEPPKISKPWSLSCLRPAPP
LKPSAALGYKERMSYIMKDSSKSPRPMKKFLPGNRKKERKASDDEIQIRKSTAALEEDAQ
ILRVIEAYCTGASTHQNTTAVRKESIPQMLLPEEEKIIVEEIKSNGQTVIEEKSLVDAVY
ALKDEVHELKKENKWMKQFLEEEQKSRKELERLVRKLTKQKNDCSWEDSGH
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaggagcaaacggtaacgtggttgatctcgtcaggagtgctcagctcgcct
aagaagaacatagcggacccggaggagtttttgaaaacctcgctgaaggatggggtcgtc
ctgtgcaagctcacagagcggttcatacctggtttcactccgaagtactgccaggatccc
agaactgaagccgactgcatttccaatatcaaggagtttttaagaggatgttcgtctttg
aaagtagagggctttgaaccagagtggttatacactggagagaactttggcaaggtcctg
aatacgctgctagctgtcaactttgccacacaagattgtgccactgagcgatgccctcag
tccggttcatcctctcctaatcaggcgacgtcctcacacacactgtcctccatcaagtcc
aaagggtctctgcgcagacagtccaaatcaacggaaatgtctgagaactgtggaggcggg
cagctgatggtgaaggcccgcttcaacttcaagcagaacaacgaggatgagctgtcgttc
agtaaaggcgacttgatcctggtgacacggcaggaggaaggagggtggtgggagggcacg
ctgaacggcaggacgggctggttccccagtaactatgtccgggaggtcaaatcctgcgaa
aaacctttgtcaccaaaagctcagctgaccaaaaactactacagtgtggtggtacaggac
atcttggagcatgagcgggagtttgttaaagagttacaaacagtgctgacttgttacctg
cagcccctgcaagccagcgacaagttaagtagtgctgacagcaccaccctgtgtggaaac
ctggaagacatcctcaccttccagcagggactttgtttagctttggaggaatgtaccaaa
gtccctgagagtcagcagcgagtggcagcctgctacttaaacctgatgaaccagataaag
aatttgtacctgacttactgttccagccacccctcagctgtttccatcctcactgatcac
agtgacgagctagaaaagttcatggagagccagggaacgagtgcctcaggagtcctgtcc
ctgaccatcagcctcagtaaacccttcatgaggctcgacaaatacccgactctgctccag
gagctggagaggcacgtggaggaagctcacccagactatactgacatcgtaaaggcaaca
gcagcattcaagagcttagtgacccagtgtcaggacttacggaagcgcaagaatctggag
ctgcagatcttatcagaaccagtgcgaggctgggagggagacagcatgaagagcctgggt
catgtgatctacatgtcccaggtccatgtaagaagtggttgcagcgaggaaaaagaggag
cgctacctaatgcttttctctaatgtgctggttatgctctctgccagtccccggatgagt
ggctttatttatcagggaaaagtgttgctaacgggcaccacactaacaagacaagtagag
gattcagacagcgcacactatgcattcgatatcacaggaagcctgatcgaccgcctaacg
gtgttctgcagcagccctcaggagttacaagaatggctggaacacctgcagccgtttacc
aaaggaggcagccctgcagggaccatctcaaagaatgtagaaggcaagctgctgagcacg
gtcggcgtcccctcacatccaccccacctgggcggcatcagtgctgtgggtcgaggcccc
ctggaaccgccaaagatcagcaagccttggtccctcagctgtctgcggcctgcaccgccg
ctgaagccctccgctgcgctgggctacaaagagaggatgtcttatatcatgaaggactcc
agtaagagcccacggcccatgaagaagttcctgcccggcaacaggaaaaaagagcgcaaa
gcctctgatgacgagattcagatcaggaaaagcaccgctgctctggaggaggatgctcag
atacttcgggtgattgaggcgtactgcacaggagccagcacacaccagaacaccacagca
gtgcggaaagagagcatcccccagatgctcctgcctgaagaggagaagatcatcgtggag
gagattaaaagcaacggacagacggttattgaggaaaagagcctggtcgatgctgtttat
gctttaaaggatgaggttcatgaattgaaaaaggagaacaagtggatgaagcagtttctg
gaggaggagcagaagtctcgcaaagagctggagaggctagttcggaaactgaccaagcag
aagaacgactgctcctgggaggacagcggccactga
DBGET
integrated database retrieval system
