Austrofundulus limnaeus (annual killifish): 106535446
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Entry
106535446 CDS
T06063
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alim01009
]
106535446
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106535446
Protein phosphatases and associated proteins [BR:
alim01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106535446
Membrane trafficking [BR:
alim04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
106535446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Motif
Other DBs
NCBI-GeneID:
106535446
NCBI-ProteinID:
XP_013887901
UniProt:
A0A2I4D6N2
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MASPVPGSTSGGRDGIYHKEHGPSPPRLWPIHSLPDVCPKEPTSEGRGLCNGPSVVSEHD
RWTVYSSKVNLPAALNDPRLAKRESDFFTKTWGLDFTETEVMPSFYLPNITRDHFGPYLQ
EMSQRERIHERCKTICPNKDDMDAVSSITTNYDKSRIELEQVPKIFMKPDFALENPATFN
TVLPWSHFHSAGGKSSRDGASSKLLQEKLSHYLDVVEVSIAQQISLRSEAFFHAMSSQHE
LQDRLQETQQAVAFLRSRTAAMDRVMCQGPLWLLHSSLTQNNCVKLHNKLKLMAVVHQTQ
PTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLGSQLCELERLIDKMMVEDFSM
YARSDLNRSLKEELQVLEKERLESLVFGLLRQRKLDFLYIYSNEMIVAAKAIVTQCVADS
VVHIEQIDTEVVFKLADQIHLMTFPQWFELLKNVFEC
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcctccccagtgcctggctccacgagtggaggcagagacgggatttaccacaaggag
catggtccctccccgcctcgcctctggcccattcactctctgcctgatgtctgcccgaaa
gagccaaccagtgaggggcggggcctgtgcaatggtccatctgtggtgtcagaacatgac
cggtggaccgtgtacagttcgaaggtcaacctccctgctgcactgaatgacccacgactt
gccaaacgagagtctgactttttcaccaaaacatgggggctggacttcacagagacagag
gtaatgccctccttctacctccccaacatcaccagggaccacttcgggccatacctgcag
gagatgagccagagggaacggatccatgaacgctgcaagacaatctgtcctaacaaagat
gatatggacgccgtttccagtatcaccaccaactacgataaatccagaattgagctggaa
caagtgccaaagatttttatgaagcctgactttgctttggagaacccagccaccttcaac
actgtcctgccctggtctcactttcacagtgcaggagggaagagcagcagagatggggcc
tcctccaaactgctgcaggaaaagctcagtcactacctggatgttgttgaggtcagcatt
gctcagcagatctcgctgcgttccgaggcttttttccacgccatgtcctcacagcatgag
ctacaggaccggctgcaggagacccagcaggccgtggcttttctgcggagccgaacagca
gccatggaccgagtcatgtgccaggggcctctgtggctcctccactcttctctgactcag
aacaactgtgtgaaactgcacaacaagctaaagctaatggcagtggtccatcagacacag
cccactgtgcagctgctgctctccacctcagagtttgttggagcactggagctcatcgcc
actaccaaggaggtgcttcagcaggagcttcagggcatccacagcttcagacatctgggc
tcccagctgtgtgagctggagaggctgattgacaagatgatggtggaggacttcagtatg
tacgcccgcagtgatctgaaccgaagtctaaaggaggagctgcaggtgcttgaaaaggag
cgtctggagtcgctggtgttcggactgctgcggcagaggaagctggacttcctgtatatt
tatagcaatgagatgatcgtagctgctaaggccattgtcacacagtgtgtggcagatagt
gttgtgcacattgaacaaattgacactgaagtcgtctttaagctagctgatcagattcat
ctgatgactttccctcagtggtttgagctgctgaaaaatgtctttgagtgc
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