Austrofundulus limnaeus (annual killifish): 106535459
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Entry
106535459 CDS
T06063
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein-like
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106535459
Membrane trafficking [BR:
alim04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
106535459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
Patched
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
106535459
NCBI-ProteinID:
XP_013887920
UniProt:
A0A2I4D6Q3
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MTLREQLRGKISAAFYRHGLLCASYPVPIILFTSASILTCCYPLLRLPLPGTGPVEFTTG
VRDYSVPSHEPQGDLGDRPDWYHGPPVAYIQQVLVKAAVSPWDSNLVPVDVFRSPLGKVF
SLLEEIRNHVHTDSSGIRSLESLCLQVTDLFPGLRRMQSVLPEHGCLLVSPGNYWQNQRE
LFDSDPDLFRTIQKHEPKGLHTSATLRDLLFGVPGKYTGVSHYNKKRVVTYTITVVLSSY
DASFLSSLRTRLKQLHPSNNCSLRDDHMVHVHFKEEIGIAELIPLVTTYIILFAYIYFST
RKIDMVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLV
LTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATELCIILIGYFTLVPAIQEFCLFAVV
GLVSDFFLQMFFFTTVLSIDIRRMELADLNRRLPAEAGLPPPKPGPLRTREVPPPPRPSP
HTITLQTPAFRNLRLPKRLRVVYFLARTRLAQRIIMAGTVIWIGILVYTDPAGIRTYLAA
QVSEQSSLGDPGGGGLPPHLAVVPVFRGGDPTSTLSIHPAPDPTPLPENQSQGHHSSARG
GSLPQAPPAVPQITWGAEDEEGWRRLSFRHWPSLFSYYNITLAKKYISILPVIPVTIHLR
PQEAIDTRHPQDTRHPPLSIPKVSADLQTDLTLYKVAALGLAAGVLLVLLLFCLYRVLCP
RNYGQNGVAHGRRRRGDLPCDEYGYSPPVSEISPLLLRGHSMDIECLASDGMLLASCCLA
GQIRVWDAQTGDCLTVIPKQGLRRSSSSGCWDQRDVWDNISGTTESDCACEPRDPSIGCD
GVPEDKCYPLRRRSSPTRPPLFTDQPDLTPLIDTNFTSQPPCSPPTPPRGGFDFGGLVKR
AYMEHEPPSPSTYPSPSSASSSPPTGGQVQRSLCLGESAGLSNPEKDSGAGASSPAASGD
WESSVWAMELRGNLIAAGRSSGKLELWDAVEGSLRCSNEDGVSGITALAFLNNRIVAARL
NGSLDFFTVEINKPLGLLQYRGAPGRGSMPPSPCYSSEDLISCQLTRSVQCAHQKPITVL
RAAAGRVVTGSQDHTVRVYRLEDSCCLFTLQGHSGGITAIYIDQTMVLASGGQDGAICLW
DVLTGSRVSHVYGHRGDVTSLVCTISCVISSGLDDIICIWDRSTGIKLYSIQQEVGCGAS
LGVISESLLVTGGQGCVSFWDLNFGDLLQTVYLSPSGDGQGVRQLLVLDNAAIVCDFGSE
LSLVYVPSVLEKLD
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcgcgagcagctgagagggaagatctcggcggccttctaccgccacgggttg
ctgtgtgcctcctacccagtacccatcatcctcttcacctctgccagcatcctcacctgc
tgctatccgttattgaggctcccgctgcctgggacgggtcctgtggaattcaccacaggg
gtgcgagactacagcgtcccttcccatgagcctcagggagacctcggagatcgacctgac
tggtaccacggacctccggttgcctacattcagcaggtgttggtgaaggcggcggtgtct
ccatgggacagcaacctggtgccggtagatgtgtttcggtcacctcttggaaaagtcttt
agtctgctggaagagatccgcaaccatgtccacactgacagctctggcattcgcagcctt
gagtcactgtgtcttcaggtgacagacttgtttccaggcttacggcggatgcagtcggtg
ctgccagaacacggctgtctgctcgtctctcctggtaactactggcagaatcagcgggag
ctgttcgactcggaccctgacctcttcaggaccatccagaaacacgaaccgaaaggactg
cacacctcagcaacactgcgagacctgctctttggtgttcctggaaagtacaccggagtc
agtcactacaataagaagcgagtggtgacgtacacgatcaccgtggttctttccagctac
gatgcaagttttcttagcagcttgcggacccgcctgaagcagctccacccctcaaacaac
tgcagcctgagagatgaccacatggttcacgtccacttcaaggaggagatcggcatcgct
gaactcattcccctcgtcaccacttacatcatcctgttcgcctacatctacttctccaca
cgtaagattgacatggtgaaatccaagtggggcctggctctggctgctgtggttacagtc
ctgagctctctgctcatgtctgtgggtctgtgtacgctgtttggactcacaccaacactc
aacggaggtgagatctttccttacctggtggtggtgatcggtctggaaaacgtgttagtc
ctcaccaagtctgtcgtttccactcctgttgaccttgaggtcaaacttcgtattgctcag
ggccttagtaatgagagctggtctatcatgaagaacatggctactgagctgtgcatcatc
ctcattggatatttcaccctggtgccagctatccaggagttctgtctttttgctgttgtg
ggcctggtctctgatttcttcctgcagatgtttttctttacaacagtgttgtctatagat
atccgccgcatggagctggctgacctgaaccgccgcctgccagccgaagctggtcttccc
ccaccaaaacctggccccctgcggacacgggaggtcccccctccaccacgaccctcccca
cacacaattaccctgcagaccccggccttcaggaacctgaggctccccaagaggctgcga
gtggtttacttcctggctcgtacacgtttggctcagcgcatcatcatggccggcacggtg
atctggatcggcatcctcgtctacactgacccggcagggatccgcacctacctggctgca
caggtgtctgagcagagctccttgggagaccccggaggaggcggtctgcccccgcacctg
gcggtggtgcccgttttccgtggcggggatcctaccagcacgttaagtatccaccctgca
cctgatccaacccctttacccgagaaccagtcgcagggccaccacagctccgccagagga
gggtctcttccccaggccccgcccgctgttcctcagattacctggggggctgaggatgaa
gagggatggaggaggttgtctttccggcactggccatcacttttcagctactacaacatc
actttagcaaagaagtacatcagcatcttacctgtcattcctgtcaccattcacttgagg
ccccaggaggccatcgacacgcgccaccctcaggataccagacaccctccactttccatc
cctaaagtctctgcagacttacagacggacctcaccctctacaaggtggcagctctgggc
ctggctgctggcgtcctgctggtcctcctgctcttctgtctctaccgggttctgtgccct
cgtaactacggccagaacggcgtggctcacgggcgccggcggcgaggcgacctgccctgc
gacgaatacggttactccccacctgtcagtgagatctcaccgctgctgctgcgaggccac
agcatggacatagagtgtttggccagtgatgggatgctgctggccagctgttgtctggct
ggacagattcgtgtttgggacgctcagactggtgactgtctgaccgtcattccaaagcaa
gggttgagacgaagcagcagcagtggctgctgggaccagcgagacgtctgggacaatata
agcggaaccacagagtcagactgtgcgtgtgaacctcgagacccctccatcggctgcgac
ggggtaccagaggacaagtgttaccccctgagacgccgcagttcgcccacccgcccgcct
ctgttcaccgaccagcctgatctgactcctctcatcgacaccaacttcacctcccagccg
ccctgcagcccccccacaccacccagaggaggctttgactttggaggactggtgaagcgg
gcctacatggagcacgagccgccatcaccttccacctacccctctccgtcctcggcctcc
tcctcgcctcctacaggaggtcaggtccagaggagtctatgcttaggggagtcagctggg
ctgtcgaacccagagaaagactctggagccggggcatcttcgccagcagcgtctggagac
tgggagagctccgtctgggccatggagctgagaggaaacctgattgctgctgggaggagc
agtggcaaactggagctgtgggatgcagttgaaggctcgctgcggtgcagtaatgaagac
ggtgtttctgggatcacagctctggcgtttctcaacaacaggattgtggcggcccggctg
aacgggtctttagatttctttactgttgagattaacaaacctttaggtctcctgcagtac
agaggggcccctgggcgaggcagcatgcccccatctccctgttacagcagtgaagacctg
atcagctgccagctgacgcgctccgtgcagtgcgctcaccagaaacccatcacggtgctg
cgagcggccgccggcagggtcgtcaccggcagccaggaccacacagtccgggtttaccgc
ctggaggactcgtgctgcctcttcacactgcagggtcactctggagggatcacagccatc
tatattgatcagacgatggttctggcgagcggcgggcaggacggagccatatgtttgtgg
gacgtcctgacaggaagtcgcgtcagccacgtctacggccaccgcggtgacgtcacctcg
ctggtctgcaccatctcttgcgtcatcagctcaggactggatgacatcatctgcatttgg
gaccgcagcactgggatcaaactgtactcaatccagcaggaggtgggttgtggggccagt
ctgggcgtgatctccgagtccctgctggtgacggggggccagggctgcgtctccttctgg
gacctgaacttcggcgacctgctgcagacggtctacctgagcccgagcggcgacggtcag
ggcgtccggcagctgctggtgctcgacaacgccgccatcgtctgcgacttcggcagcgag
ctcagcctggtatacgtgccttcggtgctggagaaactggactga
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