Austrofundulus limnaeus (annual killifish): 106535524
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Entry
106535524 CDS
T06063
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106535524 (rnf13)
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106535524 (rnf13)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106535524 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf_RING_Vps8_fungal
Hemotin
DUF7027
PHDvar_NSD
zf-RING_16
zf-RING_4
RINGv
PHD
VPS18_RING_C
zf-RING-like
Neur_chan_memb
LapA_dom
FeoB_associated
zf-C3H2C3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
106535524
NCBI-ProteinID:
XP_013887992
UniProt:
A0A2I4D6Y2
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYSFDNKTENFDDMPARFGYRLP
SDGLKGFLIGARPENACEPIDPPPKDNWTGAFFVLIKRFDCNFDMKVLNAQKAGYKAAIV
HNVGSEELISMGSNDLDVVKQIVIPSVFVSEETANTLKDDYAYDKGGHVVLIPDFSLPLE
YYLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLRKDQLKKLPIHKYKKGDNYDVCA
ICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDSDEGDS
GPEENEASESTPLLRSLASTSAHSFGTISGASRSERDQDSSEYEDEELDSSDSEEEVTVE
TVVVQMQQPCSEAHEQDLPRA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtctctgggaatgttgatgctgtcggccacgcagatctacaccatcttcact
gtccagctcttcgccttcctcaacctgcttcctgtggaggccgacatctctgcttactct
tttgacaacaaaactgaaaactttgatgatatgcctgcacggtttggctaccggctcccg
agtgatggattaaagggcttcctgattggagctcggcccgaaaatgcgtgtgagcccatc
gaccccccacccaaagacaactggacgggcgccttcttcgtcctcatcaaacggtttgac
tgcaactttgacatgaaggtcctcaatgcccagaaagccggctacaaggcagccattgtt
cacaacgtgggctctgaggagttaatcagcatgggatctaatgatttggatgtagtgaaa
cagatygtgatcccctctgtgtttgtgagcgaggagacggccaacactctgaaagatgac
tacgcgtatgataaggggggacacgtggtcctcatcccagacttcagcctgcctctggag
tactacctgatcccctttctcatcatagtggggatctgcctcatcctcattgttgttttc
atgatcaccaagtttgttcaggatcggcgcagagctcggaggagccgcctgcgcaaagat
cagctgaagaagcttcccatccacaagtacaagaaaggcgataactacgatgtctgtgcc
atttgcctggatgaatatgaagaaggagataaactcagagtcctgccatgttctcatgcc
taccacagtaagtgtgtggacccgtggctgactaaaaccaagaagacgtgcccggtgtgc
aagcagaaggtggtcccctcgcagggcgactccgactctgactcggacgagggggacagc
gggcccgaggagaacgaggcgtccgagagcacgccgctgctgcgctccctggcctccacc
agcgcccactccttcggcaccatatcgggcgcgtcgcgctccgagcgggaccaggactcc
tccgagtacgaggacgaggagctggacagcagcgacagcgaggaggaggtgaccgtggag
accgtggtggtgcagatgcagcagccgtgctccgaggcccacgaacaggacctgccccga
gcttga
DBGET
integrated database retrieval system
