Austrofundulus limnaeus (annual killifish): 106535594
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Entry
106535594 CDS
T06063
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04217
Necroptosis
alim04622
RIG-I-like receptor signaling pathway
alim04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
106535594
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106535594
04625 C-type lectin receptor signaling pathway
106535594
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alim01002
]
106535594
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106535594
Enzymes [BR:
alim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106535594
Peptidases and inhibitors [BR:
alim01002
]
Cysteine peptidases
Family C67
106535594
Ubiquitin system [BR:
alim04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106535594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
UCH
DZR_2
Motif
Other DBs
NCBI-GeneID:
106535594
NCBI-ProteinID:
XP_013888087
UniProt:
A0A2I4D779
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MDPSEKMFFILTEKPKYILPRLGCICYIRKYKYESEISKSASLKKLRVIPLPNAMLDYDI
DMNCMKSLSPEEADLLLAVPEEDRLRCFRDRKAVQAALTLDVGSLVVVDEDGENLRGIVR
YIGPLTEPSRSCPITGTFFGIELQGTDKGKGNTNGSYKNRQRFTCDKDCGVFAPFSRIRP
AVSRSLSRTMSDPRSQPDAGALSPGDRVVFFIDNKCRQGMVVNLEEQNGKQYVRISTDTD
EAGKRGGEVKVSIESVSKGEIPSGPESMMVDPPPVEEPADPHMDLNSMVEVTLGKGNCYG
IIRWMGFLPEREDKMVGLELEEDKGVSDGTFKGQRLFECPPRRALFVKLGSCRPDSRFQT
VSDDHVENMSDPDMLEEEAGYSTGNLEFVPPISSEQVQRVLIGRMKGIQGHCNSCYMDAA
LFGLFSCSSVLDSMLFKSTTPQDAPIQRTLLRDIVNPLRSKGFVEGRHVMRFRQQLQKHG
YSHSFTTDEKDPEEFLIIVMHHILALDPLLKLSAAGKVQESYCYQIFLDQNHSLVLPTVQ
QLLEHSFHSAGLKLAEVPSCLILQMPRFGKKFKMFDKIIPSLELDITDLLSEGPQQCILC
GNLAVEECTDCFKEFVFSSTGFKVFCRTCSAQVHAHPQRRAHRPAPLDIPKGYLGRGVPH
TLTRDRLELFSVLCIETSHYVSFVKHGPNKHDWIFFDSMADRQGETDGFNIPEVQACPEV
GVYLDMSPTELANQTPRDMNSVAKRLFCDAYMYLYQNTNMCLYR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggatccatcagaaaagatgttcttcatcctaacagaaaaacctaaatacattctacct
cgtcttggatgtatttgttatattcgtaaatacaaatatgaatcagaaatctcaaaatct
gcttcactaaagaagctgagagttattcctttaccaaatgcaatgttagattatgatatc
gacatgaactgcatgaagagcctgagtccagaggaggctgacctgctgttagccgtacca
gaagaagacaggttgaggtgcttcagagacaggaaggcagtccaggcagccctgaccctg
gatgtgggatccttggtagttgtggacgaggatggagagaacctgagaggcatcgtccgc
tacattggacccttaaccgagcccagtcgttcctgccccattacagggaccttctttgga
attgaactacagggcacggacaaagggaagggaaacaccaacggcagttataaaaacaga
caacggttcacatgcgacaaagactgcggcgttttcgccccgttttccagaatcagaccg
gcggtttccagatctctgtctcgcaccatgtccgacccacgctctcagccggacgccggg
gcgctgtccccgggagacagagtcgtcttcttcatcgacaacaagtgtcgccaaggcatg
gtggtgaacctggaagagcagaacgggaagcagtatgtgcggatctccactgacacggac
gaggctggaaagagaggaggagaggttaaagtttcaatagaaagtgtttctaaaggagaa
ataccttcaggtcctgagagcatgatggtggaccccccgcctgtggaagaacctgctgat
ccacacatggacctgaactccatggtagaagtcacgttagggaaggggaactgttatggg
atcatccgctggatgggcttcctgcctgaacgtgaggataagatggttggactggagctg
gaagaagacaaaggcgtgagcgacggcaccttcaaagggcagcgtttattcgagtgtccc
ccgaggagagctctgttcgtgaagctgggctcgtgtcggcccgactcacgcttccagacc
gtctcagacgaccacgtggagaacatgtcggacccggacatgctagaggaagaggcaggc
tacagcaccggaaacctagagtttgttcctccaatcagcagcgagcaggttcagcgggtt
ctgattggccggatgaaggggatccagggtcactgcaactcctgctacatggacgctgct
ctgttcggcttgttctcctgctcctccgtgctggactccatgctcttcaaatccacgact
cctcaggacgcccccatccagaggacgctgctccgcgacatcgtcaaccccctccgcagc
aagggcttcgtggagggccggcacgtcatgaggttcaggcagcagctgcagaagcacggc
tacagccactccttcaccacagacgagaaggatccggaggagttcctgatcatcgtcatg
caccacatcctggccctggaccctctgctcaaactatcagctgctggcaaagtgcaggag
agctactgctaccagatcttcctggaccagaaccacagcctggttcttcccacagtccag
cagctcctggaacattccttccacagcgccggactcaagctggcagaggtgccatcctgt
ctcatcctgcagatgcctcgctttgggaagaagttcaagatgtttgacaaaatcattccc
tctctggagctggacatcaccgacctcctgtctgaggggccgcagcagtgcatcctgtgt
ggaaacctggccgtggaggagtgcacagattgttttaaagaatttgttttcagctcaacg
ggattcaaagtcttctgcaggacgtgttcagctcaggtgcacgctcacccccagcgccgg
gcccaccggcccgcccccctggacatccctaagggttacctgggccgcggcgtcccccac
accctgaccagggacaggctggagctgttctccgtgctctgcatcgagaccagccactac
gtgagcttcgtcaaacacgggcccaacaaacacgactggatcttcttcgacagcatggcc
gacagacaaggagagacggacggcttcaacatcccggaggtccaagcctgccccgaggtg
ggcgtgtacctggacatgtctcccaccgagctggccaatcagacgccgcgagacatgaac
agcgtggccaagcgtctgttctgcgacgcctacatgtatctgtatcagaacaccaacatg
tgcctttaccgctga
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