Austrofundulus limnaeus (annual killifish): 106535758
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Entry
106535758 CDS
T06063
Name
(RefSeq) laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106535758
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106535758
09142 Cell motility
04820 Cytoskeleton in muscle cells
106535758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_N
Laminin_EGF
Laminin_B
Laminin_II
Laminin_I
Laminin_G_3
Transcrip_act
Motif
Other DBs
NCBI-GeneID:
106535758
NCBI-ProteinID:
XP_013888289
UniProt:
A0A2I4D7S8
LinkDB
All DBs
Position
Unknown
AA seq
2416 aa
AA seq
DB search
MKLLLLLLLFLMQQAAAQQRGLFPAIFNLATNAEISSNATCGAPEPEVYCKLVEHVPGRR
MKNSHCSRCDANSVQSKERHPITNAIDGTNRWWQSPSIKNGPQFHWITITLDLKQIFQVA
YIIIKAANSPRPGNWILEHSLDGVTFDPWQFYAIGDSECLSRYNITPRLGPPTYRSDIEV
ICTSYYSKLNPLEQGEIHTSLINGRPGADDLTPDLLNFTSARYIRLRLQRIRTLNADLMT
LSTHDPQDIDPIVTRRYFYSIKDISVGGMCICYGHAQSCPLDLVTKKLQCVCEHNTCGEN
CNDCCPGYHQVPWKPGTISERNTCEKCNCHNKAIDCFYNQTVSELSLSLNTHGLFKGGGV
CINCQQNTAGVNCETCKDGYYKXSEVSPYSDFPCVECRCNPAGSESQVCSRDDSEPGQCE
CKEGFTGHRCDHCAXGYSDFPHCVQCKCNPAGSTNSDLCGPCTCKVNVMGVHCDLCKPGF
YNLQESNALGCTKCFCFGVSDVCESSGWATAQTIFRDGILHPPDSFQLPHIDGNKLTINN
NTLSGKNHQKVLWWVAPKAFIGSKLVSYGGFLNFSVVYDIPLDNKYQVLPAYCDILIEGN
GQALHLLHPLVLLLSPLAENMVAVEILPQQFVDDQNGAQVSRDDLLLVLTNMTLLLVRIH
LNTSAEGQIRLSSVSLDFADSRSSSGIQAVAVELCECPWGYSGTSCEDCAAGYFRQTESE
LSLNNQKLIYVHPCIPCHCNNHSEMCDPKTGVCQNCQHHTSGQHCELCASGYYGNITGSI
SDCSLCACPLLDNSFSPTCVSDGVGEFRCTSCQTGYEGRYCERCSVGYYGNPSLPGRGCS
QCSCSGWGSRHLKCDQLSGYCECKAGVRGQSCDQCDEHHILQLGECLSCNDSCTGLLLQD
LDKLNDYVLSFNLSNFVMAPYWHLVLLENQTRHLEAELSLKTSEMSCLSQADEDLNHVTS
DLSALLQRVQNQSDNLVKVEISTNSLAHGALLLDNISSLQDLIHELENETRLVDWTEQTV
TSAHQMHLLEEMESMLRTIRGVNLTEAKATVSQELGFSESLMNKLQGIILSNQTENEKRL
CLLITSLDDTMTTLQHAHTQLQNAAQLNTEADHLLKVVQNQLHQYQSVHQNLSLGFGSMD
GLLEDSQVLLEDIIRLSEELTNGSTVELLASQLDRWQLLLRKHVDTLVAGMKMTDALKNI
YRAESHAXDIQSHAQSMHSSTMVVCNVSQNTSQLAHLDKNITGNINSAHQMTLVAHNSAS
LAVNMIIQSKQALSEEGRAKRNITSAVLDKSQKMLILAADLQLNISKVTSRLQLVKNGVF
NFSLLLNQSINDLQTFPKGSMVSLQQAQDQTAATRSDIKESLLQLHRLTQQLQNSSSVVD
HTNTTVRETNHLMAHTQTAVNEVQQKLQDAEHRTRHLIEKIKPLSMLGNMLKKNLSNIRE
LIDQARKQAALIKVAVQADRDCVRSYRPQIQSSNFNTLSLMLKTSSPDNLLFYLGSNTTV
DFLAVEMHDGKVSLLWNVGSGTTRLEIPGTDISNNRWTRINATLIGAHGTLSVHQVDSEL
APGPGITRTSPGTSQVLDINRNTVIHIGGLGVHTQIPAGLHSSSFQGCLGEVMLDGTNIG
LWSYNKREGKCGGCFSSPQAEETSFHFDGSGFSVVHKSLKATSTSIVMLFKTLSPSGLLL
YLASINMRDFLSLELVEGHVCLTFDLGSGALIQTSNRRYNTGVWYKITLQRNKQKGYLSI
MAEDQSSDKEVLEAESPGTASDLNRSDLDPVYIGGLPSSTPVRQQVVSRSYVGCIKNVEI
ARSNFDLLRDAYGVQKGCLLTAVRSVSILPGGFVQIPPPSFSEEVELLLTFSSNKQSGLL
LAAFGKDRTHKQHFLSVHLVSGAVEVELGGVFGATGAVTVMKSDEGSFSEGKKHSVIVSI
NRKSLSLQVDDGHLKSVSLMSEVPFSQLSPLSLFVGGVPPENKTCLPIRLRALSRSFRGC
IQHVVMDRIPVDLSAAVRYEGAELNSCLFEERGRRAMLPENQDVESASDPVDLPLAQPKH
QSVSTPQTLQCVSDENPTFLPSAAQFGLSRHSHMTFINPRTAQKSISMRLVLRSRGLEGL
IILLSYSKLMDFVALSLKEGRVRLSTDFGKGPASIASSLVINDGEWHDVRVEVNRRSMWV
SVDGSPPEPITIKGHRLDVDKRLYLGGLPHGVSSRRINVSRSFPGCVQSVILNGAMLELS
KANSKLHVSSCFTKDQAGSYFNGSGYAELMHDGYKVGSDLSVSLEFQTSQSEGVFLGISS
AKVDAIGLEMIDGQVVFSMNNGAGPVSVRSTGQMLCDGQWHHLLVRKTKHVLILSVDGQR
YTTPNPYPQSTSAETNNPVYLGGYPANVKQNCLTISSRFRGCLRNLQLIKSHLSVIADLS
SAYFLLGVTPESCPGA
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttttgctgctgctgctgctgtttctgatgcagcaagctgcagctcagcagaga
ggactttttccagccatctttaacctggccactaatgcagagatcagcagcaacgccaca
tgtggagctccagagccagaagtttactgtaaactggttgaacatgttccgggtcgtaga
atgaaaaactcacattgctcaagatgtgacgccaactccgtccagtctaaagaacgtcat
ccaatcacaaatgcgattgatggaactaaccggtggtggcaaagtccaagtatcaagaat
ggaccccagtttcactggatcaccattaccctggatctgaaacagatttttcaagttgcc
tacattataataaaagcagccaactctccacgaccaggtaattggatcctagaacactct
ttagatggagtgacctttgacccctggcagttttatgccattggtgattcagaatgtttg
tctcgttacaacatcactccccgactcgggccgcccacctacaggagtgacattgaggtc
atctgtacttcctactactccaaactgaacccactggaacaaggagagattcacacatcc
ttaattaatggacgtcccggagccgatgatttgacccctgatcttctgaactttacatca
gctcgttacatcagactgagacttcagcgaataagaactcttaatgccgacctcatgaca
ttaagcacccatgacccacaagacattgacccaattgtgaccaggaggtatttctactcc
atcaaagatatttctgtgggtgggatgtgcatctgctatggacatgcccagagctgccca
ttagatctggttacaaagaagctacagtgtgtgtgtgagcacaacacctgtggagaaaac
tgtaatgactgctgccctggttaccatcaggtgccttggaaaccaggaactatctctgag
agaaacacctgtgaaaagtgcaactgtcacaacaaagccatagactgtttttacaatcag
actgtttctgaactctctttgagtttgaacactcatggtctgtttaaaggaggtggggtt
tgtataaactgtcagcaaaacacagctggtgtcaactgcgagacctgcaaggatggctac
tacaaacyctctgaggtgtctccatactcagatttcccgtgtgtggagtgcaggtgcaat
ccagctggatcagagtcccaagtctgcagcagagatgactcagaaccaggccagtgtgaa
tgtaaagagggcttcacaggtcatcgatgtgatcattgtgcatytggatacagcgatttt
cctcattgtgttcaatgcaagtgtaacccagcaggtagcaccaactctgacctttgtggc
ccctgtacctgcaaggtgaacgtgatgggagtccactgtgatctatgcaaaccaggtttt
tacaacttacaggaaagcaacgctctcggatgtaccaagtgtttttgttttggtgtttct
gatgtctgtgagagttctggctgggccacagctcagactatttttagagatggaatactt
catccgcctgattctttccaactcccacacattgatggaaataaactcacaattaacaac
aacactttgtctggcaaaaaccaccagaaggtgctgtggtgggtggcacctaaagctttc
attggcagcaagctggtatcttatggagggtttctcaatttctctgtggtttatgatatt
ccattggacaacaaataccaagttctgccagcctactgtgacatcctcattgaggggaat
ggtcaagctcttcatctcttgcatcctctcgttctcttactctcccctctggctgaaaac
atggtggctgtggaaatacttcctcagcaatttgtggatgatcaaaatggtgcacaagtt
agtcgtgatgatctgctgttggtgttaactaacatgacattactgttagtcagaattcac
ctgaacacctcagctgaaggacaaatacggctcagctcagtctctttggactttgcagat
tccaggtcaagttctggcattcaggcagttgccgtggagctgtgtgaatgtccatggggt
tatagcggcacttcctgtgaggactgtgcagcaggttatttccggcagactgagtctgag
ttgtctctgaacaaccaaaagttgatctatgttcatccatgcattccatgtcattgcaac
aaccacagtgaaatgtgtgacccaaagactggagtgtgtcagaattgtcagcaccacacc
agtgggcagcactgtgaactttgtgcctcagggtactatgggaacatcactggatccatc
agtgactgttctttgtgtgcctgccccctactggacaacagtttcagtcccacctgtgtg
tctgatggagttggagagttccgctgtacttcctgtcagacaggatatgaaggcagatac
tgtgagaggtgttctgttgggtattatggtaacccttcacttccaggacgtgggtgttca
cagtgcagctgcagtgggtggggctcccgccatctcaagtgtgatcagctcagtgggtac
tgtgagtgtaaggctggggtcagaggtcagtcatgtgaccagtgtgatgagcaccacatc
ctgcagctgggagagtgtttgtcatgtaatgacagctgcactggccttctgctccaagac
ctggacaaattaaatgactacgttctgtctttcaatctgagtaacttcgtcatggcacca
tattggcacctggtgctgctggagaatcaaaccagacatttagaggctgagctttctttg
aaaacatctgaaatgtcatgtttgtctcaagcggatgaggatttaaatcatgtgacttct
gatctcagcgctctgctacagcgggtccaaaatcaatctgacaacctggtgaaagttgaa
atctccaccaacagtttggcccatggtgcactgctgcttgacaacattagcagccttcaa
gacctcattcatgagttagagaacgagacaagacttgtggactggacagagcagacggta
acatcagcccatcaaatgcatctattggaagagatggagtccatgctgcgaaccatcaga
ggtgtcaatctgacagaagccaaggcaacagtcagtcaggagcttggtttttcagagtcc
ctcatgaacaaactgcaggggattatattatctaaccagactgagaatgagaagagactc
tgcctcctcatcacctctctggacgacaccatgacaactctgcaacatgcacatactcaa
ctacagaatgctgcacagctaaacacagaagcagatcacctgctgaaagttgtacagaat
cagctgcatcaatatcagtctgttcatcagaacctcagtttggggtttggatccatggat
ggactactggaggacagccaggtgctgctggaggacatcatacgtctaagcgaggagtta
accaatggcagcacagtggagctgttggcgtctcagctggatcgttggcagcttttactc
aggaaacatgtggacactctagttgctggaatgaaaatgacagatgctcttaaaaacatt
tatcgtgcagagagtcatgccyacgacattcaaagccacgcccaatccatgcacagctcc
acgatggtggtgtgtaacgtgtcccagaacaccagccaactggctcatcttgacaagaac
atcacaggaaacattaactccgcccaccagatgaccttggtagcccacaactctgcctcc
ctcgctgtcaatatgatcatccaatcaaagcaggctctttcagaggagggcagggccaaa
cggaacatcacctctgctgttttagacaaaagtcagaagatgctaattttggctgcagat
ctgcagctgaatatttccaaagtaaccagcagactacagctggtcaaaaatggtgtattt
aacttcagcctccttctcaatcaatccatcaatgatctacaaacctttcctaaaggttca
atggtgtcacttcaacaggctcaggatcagactgcagcaactcgctctgacattaaggag
tcactgcttcagctgcacagactcacacagcagctgcagaattcttcttctgtagtggat
cacactaacaccacagtgagggagacaaaccacctgatggctcacacacaaactgcagtc
aatgaggtgcagcaaaagctccaagatgctgagcaccgtacacgacatctgatagagaaa
ataaagccgctgagcatgctgggaaatatgctgaagaagaacctctccaacatcagagaa
ctaattgatcaggcccgaaaacaggcagcattgataaaggtagcagtccaggctgacaga
gactgcgttcgatcctacagacctcagatccagtccagtaacttcaacactctgagtcta
atgctgaagacctccagtccagataacctgctcttctacctgggcagcaacactacagtg
gacttcctggctgtagagatgcatgatgggaaggtttccctgctttggaatgtgggttct
ggcaccacacgactggagattcctggaactgacatttccaacaacagatggaccagaatc
aatgctaccctgattggggcccatggtaccctgtctgtccatcaggtggactctgagttg
gctccaggacctggaataacaagaacatcaccaggaacatcacaagttttagatatcaac
agaaacacagtgatccacattggtggactgggagttcacactcagattcctgcagggctg
cactcatcctcattccagggctgcctgggtgaagtcatgctagacgggacaaacattgga
ctgtggagctacaacaagcgagaggggaagtgtggaggctgcttcagcagtccccaagca
gaggagacatccttccacttcgatggttctggtttctctgtggtccacaagtctctgaaa
gcaacatccacttccattgtgatgctgtttaaaactctgtctccaagtgggctgctgctg
tacctggcttctatcaacatgagggacttcttgtctttggagctagtagaggggcatgtc
tgtctgacctttgacctgggatcaggtgctttaatccagacctcaaacaggaggtacaac
acaggagtttggtacaaaatcacactgcagaggaacaaacaaaaaggttacctgtctata
atggcagaagaccaatcatcagataaggaggttttggaggcagagtctccaggaacagct
tctgaccttaaccgctctgaccttgacccagtctatatcggaggacttccgtcttccaca
ccagtcagacaacaggttgtttctaggtcatatgttggctgtataaagaatgttgagatt
gcccgttccaactttgacctgctgagagatgcatatggagtccagaaaggttgccttctc
acggcggtgagaagtgtgtccattttgcctggaggctttgtccagatacctcctccatca
ttcagtgaggaggtggagcttctccttaccttttcctccaacaagcagtcaggactcctt
ctggctgcctttggtaaagaccgaacacacaaacagcacttcctgtcagttcacctggtc
tcaggtgctgtagaggtggagcttgggggtgtatttggagccactggtgccgtcacagtg
atgaaatctgatgaaggatctttcagtgaaggaaaaaaacactctgtgattgtttctatc
aacagaaaatctttgtccttgcaggtggatgacggacacttaaaatctgtttctctgatg
tcagaagtcccgttttctcagttgtcccccttatctttattcgttggtggtgtcccacct
gagaacaagacctgtctgccaatcagattgcgtgctttaagcaggtcatttagaggttgc
atccaacatgtagtgatggacagaatacctgttgacctatcagcagcagtcaggtatgag
ggcgcagagcttaacagttgcttatttgaggagaggggtagaagggcaatgcttcctgaa
aaccaggatgtagaatcagcatctgaccctgtagatctgcctttagcccaacctaaacac
caaagtgtatccacacctcaaactttacagtgtgtttcagatgaaaatcctacctttctg
ccatcagcagctcagtttggtttatccagacacagtcacatgaccttcatcaaccccaga
acagctcagaaaagtatatccatgaggttggtacttcgaagccgtggtctggaaggactg
ataattcttctctcttactccaaactgatggactttgtggccctcagtctcaaagagggc
cgtgtcaggttgtcaactgactttggaaaaggccccgcctctattgcctcatctcttgtt
attaatgatggcgagtggcatgatgtcagggtggaggtgaaccgacgatcaatgtgggtt
tctgttgatggttcacctccagagcccatcacaatcaaaggacaccgcctggatgtggac
aagagactgtacctgggagggttacctcacggagtgtccagcaggaggatcaatgtcagc
agaagctttccaggttgtgttcaatctgtcattctgaatggtgccatgctggaactttcc
aaagcaaattcaaagcttcatgtttcttcctgctttaccaaagaccaggcagggagttat
ttcaatggcagtgggtatgctgaactaatgcatgatgggtataaagttggctcagacctg
tctgtgtctctggagttccaaacaagccagtcagaaggtgtatttctaggaatcagcagt
gcgaaggtggatgctattggactggaaatgattgatggacaggtggtgttcagtatgaat
aatggtgctggtccagtttcagtgcgttccactggtcagatgctgtgtgatggacagtgg
catcacctgctggtcagaaaaactaaacatgtcctgattttgagcgtagacgggcaaaga
tacaccacccccaacccctatccacaatccacctctgctgagaccaacaaccctgtgtac
ctgggaggatatccagcaaatgtcaaacagaactgtctgaccatcagctctaggttcaga
ggttgcctgaggaacctgcagcttattaaatcccatctgagtgttattgctgaccttagc
tccgcctacttcctgttgggcgtcactcctgaatcttgccctggggcctag
DBGET
integrated database retrieval system
