Austrofundulus limnaeus (annual killifish): 106535846
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Entry
106535846 CDS
T06063
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106535846
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
106535846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_3
DUF4523
Myb_DNA-binding_7
Motif
Other DBs
NCBI-GeneID:
106535846
NCBI-ProteinID:
XP_013888425
UniProt:
A0A2I4D851
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MATAASRYHSEDGRASKRQKTDGMATGYEDPHKTLPSVVVHVRGLMDGVTEADIVEALQE
FGAISYVVVMPNKRQALVEYEDMNGSSTAVTYAADNQVYIAGHPAFINYSTSKKISRPGD
SDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKNGVQAMVEFDSVQSA
QRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLGGSDGDADGNGSGS
EDVNANPNKRQRQPALLGDHPPEYGGGYHGYDESYGSSPYEGRRMGPPMRGRGGRSYGPG
YGPPPPPPGEYGAHADSPVVMVYGLDPSKMNADRVFNIFCLYGNVERIKFMKSKPGAAMV
EMGDCYAVDRAITHLNNNFLFGQKLNVCVSKQQAIVPGQFYDLEDGTSSFKDFHNSRNNR
FTSPEQAAKNRIQHPSNVLHFFNAQPDASTETFSQICEEIGVKTPVNVKLFTGKNGADRS
DRSSSGLLEWESINDAMEALALINHYQMKNPGGPYPYTLKLCFSTVQHAN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcagcgagccgttaccacagcgaagacggcagggcatcgaaacgacagaaa
accgacggaatggccacggggtacgaagacccacacaagacccttccctcggtggtggtt
catgttcgtggtctgatggatggcgtcacggaggccgacattgtggaggccctgcaggag
tttggagccatcagttatgtggttgtgatgccgaacaaacgccaggccctggtggagtac
gaggacatgaacgggtcgtctacggccgtcacttacgcggcagacaaccaagtctacatc
gccggccacccggccttcatcaactattctaccagtaagaagatttccaggccgggagac
tctgacgactccaggagcgttaacaacgttctcctcttcaccatcatgaaccccatctac
cccatcaccacggatgtcctctacaccatctgcaacaactgtggccccgtgcagagaatc
gtcatctttaggaagaacggcgttcaggccatggttgagtttgactcggtgcaaagtgct
cagcgagccaaggcgtcgctcaacggggccgacatctactctggctgctgcactctgaag
attgagtacgcaaagccgactcgtctgaatgtgttcaagaacgaccaggacacgtgggac
tacaccaaccccaacctgggaggctcagatggtgatgccgatggcaatggaagcggttca
gaagatgtgaacgccaacccaaacaagcgccagagacagcccgccctgctgggagaccac
cccccagaatatggaggcggttaccatggctacgacgagagctacgggtcctcgccttat
gagggccgcaggatgggtcccccgatgagagggcgcggcgggaggagctacggccccggc
tacggaccccctcccccgccccccggtgagtacggcgcccacgctgactccccggtcgtc
atggtttacggcctggatccttccaagatgaacgccgaccgtgtcttcaacatcttctgt
ctgtacgggaacgtggagcggatcaagttcatgaagagcaaacctggagctgccatggtg
gaaatgggagactgttacgccgtggatcgagccatcacacacctgaacaacaacttccta
ttcgggcagaaactgaatgtttgcgtgtccaagcagcaggccatcgtgcccgggcagttc
tacgacctggaggacggcaccagcagcttcaaagatttccacaactccagaaacaaccgc
ttcacgtccccagaacaggccgccaaaaaccgcatccagcacccgagtaacgtgctgcac
ttcttcaacgctcagcccgacgcctccacagagacgttctctcagatttgtgaagaaatt
ggtgtcaagacccccgttaacgtcaaattgttcacagggaaaaacggtgccgatcgcagc
gaccgcagctcctcaggtctgttagagtgggagtccatcaacgatgccatggaggctctg
gccttgatcaaccattaccaaatgaaaaacccaggtggtccgtacccctacacgttaaaa
ctctgcttctccaccgttcagcacgctaactaa
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