Austrofundulus limnaeus (annual killifish): 106535939
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Entry
106535939 CDS
T06063
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03420
Nucleotide excision repair
alim04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106535939
09124 Replication and repair
03420 Nucleotide excision repair
106535939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
alim03051
]
106535939
03400 DNA repair and recombination proteins [BR:
alim03400
]
106535939
Proteasome [BR:
alim03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106535939
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
106535939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
Dsc3_N
CUE
UBA_3
Metal_resist
OTU1_UBXL
UBA_2
Motif
Other DBs
NCBI-GeneID:
106535939
NCBI-ProteinID:
XP_013888547
UniProt:
A0A2I4D8J1
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MLITLKTLQQQTFKVDIDEEETVKTLKERIEQEKGEEHFPFAGQKLIYAGKILNDDTPLK
EYKMDEKNFVVVMVTKPKTAPVTSQTSAAPVAPAAPAAPPASSSSSSKPAEQPSPDDKPE
EKQPSAAEPSSEPSSTTVGSSEASTSSDLISEAVSTLVTGSSYDAMVNEMMLMGYEREQV
VSALRASYNNPDRAMEYLLSGIPGRDQGPATGPDAAAPPAAPASSVSAPANTGSSPSAAG
GENPLSFLRSQPQFQVMRQLIQQNASLLPTLLQEIGRENPELLQEISNHQEQFIQMLNEP
NTDPVPGGEEREARGAGRVGGEATSGSHVSYIQVTPQEKEAIERLKALGFPEGLVIQAYF
VCEKNENLAANFLLQQNFDDE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgataactttgaagactttacagcaacagacgtttaaagttgacatcgacgaagag
gagacggtgaaaacattaaaagagaggattgaacaggagaaaggagaagagcactttcca
tttgctggtcagaaactgatatatgctggtaaaatccttaacgatgacacgcctctcaaa
gaatacaaaatggatgagaagaactttgtggtcgtcatggtgacaaagcctaaaacggcc
ccagtcacctctcagacgtcagcagctcctgtagcacctgcagctcctgcagcgcctcct
gcttcctcatccagctccagcaaacctgcggagcagccttctcctgacgacaaaccagag
gagaaacagccttcggcagctgaaccgtcgtctgaaccatcatccaccactgttggaagc
tctgaagcttccacaagctcagacttgatcagtgaagctgtttcgactcttgtgacaggc
tcgtcctatgatgctatggtgaacgagatgatgctgatgggctatgagcgggagcaggtg
gtgtcggctctgagagcgagctacaacaacccagacagagcgatggagtacctgctctct
ggcatcccaggcagagaccagggtcctgccacggggcccgatgcagctgcgcctccagct
gcacctgctagcagtgtcagtgctcctgccaacaccggctcctcaccaagtgctgcagga
ggagaaaaccccctgagcttcctcaggagtcagcctcagttccaggtcatgcgacagctg
atccagcagaatgcatccttgcttccgaccttgctgcaggagattggcagggagaaccca
gagctgctgcaggagatcagcaatcatcaagagcagttcatccagatgctgaatgagccc
aacacagatccagtgccaggaggcgaggaaagggaggcaagaggagcagggagagtagga
ggggaagccactagcggaagtcacgtgagctacattcaggtcacgccacaggagaaagaa
gcaatagagaggctaaaggccctcgggtttccagaaggacttgtgatccaagcctacttt
gtgtgtgagaagaacgagaacctggctgccaacttccttttacaacagaactttgacgac
gaataa
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