Austrofundulus limnaeus (annual killifish): 106535973
Help
Entry
106535973 CDS
T06063
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106535973
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106535973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Lipase_GDSL
Motif
Other DBs
NCBI-GeneID:
106535973
NCBI-ProteinID:
XP_013888581
UniProt:
A0A2I4D8L7
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MLLLSFTLTALALWRPITTQEPEFADVCTEGSCYPATGDLLIGRAHKLTASSTCGLRQPE
QFCIVGHLEDTKCFMCDSREMYDEDTNPSSHTIENVVTTFAPNRLKTWWQSENGVENVTI
QLDLEAEFHFTHLIMTFKTFRPAAMIIERSMDYGKSWQVYXYFANNCRSMFPSISAGPMX
KVDDIICDTRYSDIEPSTEGEVIFRVLDPVFAIEDPYSLRIQNMLKITNLRVKFIKLHTL
GDNLLDSREEVTEKYYYALYDMVVRGNCFCYGHASEXAPIDGQLTGAEGMVHGRCVCNHN
TDGLNCERCQDFYHDLPWRPAEGRNTHACKRCECNHHSTSCYFDHAVYVSTGEVSGGVCN
DCQHNTVGRQCEQCAQFFYQHPHRDLRDPNICEPCDCDPAGSLQGGLCDSHTDVAAGMIS
GQCRCKANVEGERCDHCRQGHYGLGESPEGCLPCTCNLLGTMPGANTCDSDTGRCFCKRL
VEGHNCDQCLPEHWGLSNDMDGCRPCNCDQGGAVNNNCDPYSGQCVCREHMFGXSCNQVE
SGFYFISLDHYTYEAEDAKHGPGVALVHRLYPQERSPTWTGMGFANVPEGGFLEFNIDNI
PETMDYDVLIRYEPQLPHQWEQVDVRVERPVFSPQVYPSHCINSGQGGDEQYTSLSPGSR
HVLLNXPVCFEKGLNYTIRLSFPYYSSIGSVQSPYTLIDSLVLMPRVSELDXFHGAEGEK
AWDTFQRYRCLENSRSVIKSPMTDICNHYIFSVSALLQKGAVACECDPHGSLSTICESSG
GQCRXRPNVVGRNCDHCAPATFLFSPTGCRPCDCDSLGSTSPFCHAATGQCECVPGATGR
QCSHCLPGFWGFPQCRPCHCNGHSEYCHPESGECQGCRDFTTGHHCERCISGYHGDPELG
SGXHCRPCMCPDGPRSGRQFADSCYLLTNQLVCVCSHGYRGARCDECAPGYYGNPLIPGG
SCMPCQCNNNIDMQDPRSCDARTGACLKCLYHTQGHACQHCKVGYHGNAATQSCRKCMCY
TVGTVSQACSSSDDCECDQRTGQCPCLPNVDGPNCDRCARDTWNIESGSGCQHCDCDPVH
SYGSYCHEVTGQCLCKPGFGGRTCQECKELFWGNPEVECRACDCEPRGISSEQCHRATGL
CTCVEGVTGPRCDKCARGYLGEFPNCEPCHRCFAVWDTVVGELTKQTQRLEAQVTELLTS
GVTAPYKELVSSLERNAKAVRAIIENRTASVQLEQIQDLMHQITGLMSYFNGKLNTTEES
LSFLHNEANITDIRLDELTDEAQKLEQNIQELKQQVLDAKNANILGAISTVIMAXTESRM
AELRSNASTSDPGNTVEQSAAVRKATEDKLSSSQKEFDRKHQRNEKKLDKLSKELDKFDL
SPLSEKMCGGSAEGEDCPPCGGLGCVGEDGAPQCGGEGCRGLVTSSKTALKSAQDLDQDI
QEAMQEVDKLSRMVWEANIRAKEAKAKAMEVMIKSNRSKERVEESNNQLRDLIREIRDLL
SNEKADANVIEAVANEVLALEMPTSAEKLQELTNEIRDRVSTLTSVETILSQSSEEMQAA
ELLLRQAKAASEEASNVKETADTVKAALDDTERAQSTALDAIRLARENIVGTTNLLILVE
SETEKSELKLSNATGRLVQLERDVGLLRQNNLEMKQQVEKTERITEQARQNAEDAQQEFD
DKVKDQFETLEEQVAGKAESVLQARKKADELQQEAKELLEQSSIKLRRLEELERSYEANQ
QILEDKAADLAVLEENAQRILDEISRKVTQYISCQY
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgctaagcttcacgttaacagccctggccctgtggcgtcccatcacaacacag
gagccggagtttgcagatgtgtgcaccgagggcagctgttaccccgccacaggtgacctg
ctgattggccgggcgcacaaactcaccgcctcctccacctgcggcctccgtcagcccgag
cagttctgcatcgtgggacacctggaggacacaaaatgtttcatgtgcgactccagagaa
atgtacgatgaggacaccaaccccagcagccacaccatcgagaacgtggtcaccaccttc
gcccccaaccgcttaaagacctggtggcagtcggagaacggtgtggaaaacgtgaccatc
cagttggacctggaggccgagtttcatttcacgcacctcatcatgacctttaagacgttc
cgtccggctgccatgatcatcgagcgttcgatggattacgggaaatcgtggcaggtttat
rgttacttcgccaacaactgccggtcgatgtttccaagcatctctgcaggccccatgytc
aaagtggacgatatcatctgtgacacccgctactcagacatcgagccgtccacagaggga
gaggtgatatttcgagtgttggacccagtatttgcgatcgaagacccctacagtttgagg
atacaaaacatgctgaagatcacgaacctcagggtgaagttcatcaagcttcacacgctg
ggagacaacctgctggactcccgtgaggaggtgacggagaagtactactacgccctctac
gacatggttgtccgtggaaactgcttctgctacggtcacgcctcagagtgrgcgccgatc
gacggacaactgaccggagctgagggcatggtccacggccgctgtgtgtgcaaccacaac
acagatggcctgaactgtgagcgttgtcaggacttttaccacgatttgccttggagacct
gcagagggacgaaacacccacgcctgcaagaggtgcgagtgcaaccatcattccacatca
tgctacttcgaccatgccgtgtacgtctcgaccggcgaggtgagcggaggtgtgtgcaac
gactgtcagcacaacacggtgggccgacagtgcgagcagtgtgcacaattcttctaccag
cacccccacagagacttgagagaccccaacatctgtgaaccttgtgactgtgacccggcc
gggtctctgcagggcggactgtgtgactcgcacacagacgtggctgcagggatgatctca
ggtcagtgccggtgcaaagccaacgtcgagggagaacgttgtgatcactgcagacaggga
cactatggactgggagaaagtcccgaaggctgcctgccttgcacctgtaacctgctggga
acaatgccaggagcaaacacctgcgattcagacacaggacgatgcttctgcaaacgyctt
gtcgaaggacacaactgtgatcaatgtctgccggagcactggggtctgtcgaatgacatg
gacggctgcagaccgtgcaactgtgatcaaggaggtgcagtcaacaacaactgtgaccct
tactcaggccagtgtgtgtgccgggagcacatgttcggargtagctgcaatcaggtggag
tccgggttctacttcatctctttggatcactacacgtacgaagctgaggatgccaaacat
ggacctggcgttgcattggtacatagactttatcctcaggagagaagccccacatggacc
gggatgggctttgctaacgtccctgagggagggtttttagagttcaacatcgacaacatc
ccagagacaatggactacgatgtccttatacgctatgagccacagttgccacatcagtgg
gagcaggtggatgttcgagtagagcgtccagtcttcagccctcaagtctaccccagtcac
tgcataaactctgggcagggcggagatgagcagtatacctctctgtcgcctggatccagg
catgtcctgctgaataakcccgtgtgtttcgagaaaggattgaattacacgatccgtctt
tcattcccatactactcatcaatcggcagcgtccagagtccwtacacgctcatcgactcc
ttggtgttgatgcctcgagtcagcgagttggacwtgtttcacggggcagagggcgaaaaa
gcgtgggatacattccagcgctacagatgtctggaaaacagccggagcgtcatcaaaagc
cccatgacggacatctgcaaccactacatcttcagtgtgtctgctctgcttcagaaagga
gccgtggcatgtgagtgtgaccctcatggttcgctcagcaccatctgtgagtccagcggc
ggtcagtgccggtgrcgacccaacgtggtcggcaggaactgtgaccattgtgctccggct
actttcctgttcagccccactggctgcagaccgtgtgactgcgactcgctgggctccacc
agccccttctgccacgcggcgaccggacagtgcgagtgtgtccccggagccacgggtcgt
cagtgttcccactgcctgccgggtttttggggcttccctcagtgccgaccgtgtcactgt
aatgggcacagcgagtactgccaccctgagagcggagagtgtcagggctgcagggacttc
accaccggacatcactgtgagaggtgtatcagtggttatcatggtgacccagaacttggt
tcaggagyccactgtcgtccctgcatgtgtcctgacgggccgcgcagtggtcgtcagttt
gcagacagctgctacctcctgaccaaccagctggtgtgcgtgtgcagccacggctacaga
ggcgccaggtgcgacgagtgcgccccgggatactatggcaaccctctgattccaggaggg
agctgcatgccctgccagtgcaacaacaacatcgacatgcargaccccaggtcgtgtgac
gcccgcaccggcgcctgcctcaagtgcctgtaccacacgcagggtcacgcgtgccagcat
tgcaaagtgggttatcatggcaacgccgccacacagagctgcaggaagtgtatgtgctac
acggtggggacggtatctcaggcctgttcctcctcggatgactgcgagtgtgatcagcgt
accggacagtgtccctgcctgcccaacgtggatggtccgaactgcgaccgctgcgcacgc
gatacctggaacatagagagcgggtcgggctgccagcactgcgactgcgaccccgtccac
tcctacggatcctactgccatgaggtcacaggacagtgtctgtgcaaaccaggatttggt
ggcaggacgtgtcaggagtgcaaagagcttttctggggaaatccagaggttgaatgtcga
gcttgtgactgcgagccacggggaatctccagtgagcagtgtcaccgagccacgggtctg
tgtacctgtgtggagggtgttacgggaccaaggtgtgacaaatgtgccaggggctacctg
ggcgagttccccaactgtgaaccctgtcaccggtgcttcgccgtctgggacacggtggtt
ggcgagctgaccaarcaaacccaacgactggaggcccaagtgacggagttgctgaccagc
ggggtgacggcgccttacaaagagttggtcagcagcttggagagaaacgccaaggctgtg
agggccatcatagagaacaggacggcctcagtgcagctggagcagattcaggacctgatg
catcagattactggcttgatgtcatatttcaacggaaagttgaatacgaccgaggagagt
ttgagctttctccacaatgaagccaacattacagatattaggcttgatgaactgacggat
gaggcccaaaagctggagcagaacattcaagagctgaagcagcaggtcctcgacgccaag
aacgccaacatcttrggagccataagcactgttattatggcakacaccgagtccagaatg
gctgagctgcgctccaacgcgtcaacaagtgatcctggcaacactgtggagcagtcagct
gcagtacggaaagccacagaggacaaactgagcagcagccagaaagaattcgatcgaaaa
caccaaagaaacgaaaagaagctggacaaactttccaaagagctggacaaatttgacttg
tccccgcttagtgagaagatgtgtggcggttcagcagaaggtgaagactgtcccccctgc
ggtggactgggttgtgtcggggaggacggagcgcctcagtgtggaggagagggttgccga
ggtctggtcacgtcttcaaaaactgccctcaaatcagcccaggacctggaccaggacatc
caagaggccatgcaggaagtggacaagctctccaggatggtgtgggaagccaacatccga
gcaaargaggccaaggccaaagcgatggaggtgatgatcaaatccaaccgcagcaaagag
cgagttgaagagagcaacaatcaactccgcgacctcatcagagagatacgagaccttctt
tccaacgagaaggctgacgcaaacgtgattgaggcggtggccaatgaggtgctggctctg
gagatgccgacgtcggcggaaaagctgcaggagctgacaaacgagatccgagacagggtc
agcaccctgaccagcgtggagaccatcctgagccagagctctgaggagatgcaggctgca
gagctgctgctgagacaggccaaggctgccagtgaggaggcatcaaacgtaaaagagaca
gcagacacagtgaaggctgccctggatgacaccgagcgcgctcagagcaccgctctggat
gccatccggctggctcgagaaaacattgtgggaacaacgaatctgctgattttggttgag
tctgagacygaaaagtcagagctgaagctcagcaacgccacgggtcgcctggtgcagctg
gagcgagacgtgggcctgctgaggcagaacaacctggagatgaagcagcaggtggaaaag
acagagcggatcacggagcaggcccgacagaacgcagaggacgcgcagcaggagtttgac
gataaggtgaaagatcaattcgagaccttggaagagcaggtggcaggtaaagcagagtcg
gtgttgcaggcgagaaagaaagcagatgagctgcagcaggaagccaaggagctgctggag
cagagcagcattaagctgcggagactcgaagagttggagcgctcctacgaagccaatcag
cagatcctggaggacaaagctgcagatctggccgtgttggaggaaaacgcccagcgcatc
ctggacgagatcagccgcaaagtcactcagtatatctcctgtcaatattaa
DBGET
integrated database retrieval system
