Austrofundulus limnaeus (annual killifish): 106536244
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Entry
106536244 CDS
T06063
Name
(RefSeq) WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106536244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alim03009
]
106536244
Ribosome biogenesis [BR:
alim03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106536244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Utp21
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_Aladin
Beta-prop_RIG_1st
PD40
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
106536244
NCBI-ProteinID:
XP_013888907
UniProt:
A0A2I4D9J4
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MPGGGSCLFSGFRVLGLYSNHVPHALRYHLKHREFYVVTSVGRSFHTFNVSRLGIVAVSN
SLSDDISCLAADRMLVFAATGRIICAFARNKEVVKRYHGHRQEVRLLLPLGDQLISADSG
GDVIVWDVQEADVYLRLTFDPNTFDVSAMMHPSTYLNKVLLGSSQGALQLWNIKTSKLLF
TFPGWSAGVTVLQQSPAVDVVGVGTATGRIIIHNIRLNETLMSFTQDWGPISTLAFRTDG
PPILASGSPQGHIAFWDLDRRQLVNQQRHAHRTAVSGASFLHGEPLLVTNGADNAIKVWI
FDQDGGGARLLRCRQGHSAPPTTICHHGNDGKNILSAGQDGTLQSFSTVHERFNKNLGHG
SINKKKEKKKKKGLSYAELRLPAITALASAVSRQSDWDGIVACHRGRLTATTWNYQRCTM
GAHQLKPPGSRRDAVATAVDITSCGNFAVIGSSCGRVDVYNLQSGLHRGCFGDQETAHSG
VVRGVATDMLNQLTLSCGSDWLLKFWRFKTRKQEEEVKLPAAAASLRLHRDSGMVAVALD
DFTLLVVDMETRRVVRKFAGHHGNITDMTFSPDGRWLVTVAMDCTIRTWDLPSGCLVDCF
LVATAPVGVSLSPTGDFLVTAHVDSLGVYLWSNRSLCGPVGLRPLPADYQPVEEVLPGFT
AEEAEQEVTSEEADDAFQSAHQLGAELVTLSLLPESRWKSLLHLDTIKKRNKPVAPPAAP
PTAPFFLPTVPGLTPRFELPVATKEDPQSKLLSFGWLAQRSDFSCALDSALQSGSFEQPL
RLLKDCGPAAISVELTCLTSQGGGDNSLLLAFIHMIDSMLASGRDFNLAHAYLALFLQLH
LHTVSQDAVVMAALLRLSSRLEAGWAELQASFNQSLCLLSYTKSALL
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaggcggcagctgtctgttctccgggttccgggttctgggtctctactcgaac
cacgtcccgcacgcgctccggtaccacctgaagcatcgggagttctacgtggtgacgtca
gtgggaagaagcttccacacgtttaacgtgagccggttggggatcgttgctgtcagtaac
agcctgtcagatgacatcagctgcttggcggcagatcggatgttggtgtttgctgccacc
gggcgaatcatctgtgccttcgccagaaacaaagaggtggtgaagcgttaccatggtcac
agacaggaagtgcgcctgctgctcccgcttggcgaccagctgatttctgctgacagcggt
ggtgatgtcatcgtgtgggatgttcaggaggcagatgtctatctgaggttgacctttgac
ccgaacacctttgacgtgtcggccatgatgcacccgagcacctacctgaacaaggtgctg
ctgggcagctcccagggtgccctgcagctgtggaacatcaagaccagtaagctgctgttt
acgtttcctggctggtcagcaggagtcactgttctgcagcagagtcctgcagtggatgtg
gtcggtgttggcacggcgacagggcgcatcatcattcacaacatccgactgaacgagacg
ctgatgagcttcacgcaggactggggaccaatcagcacgctggctttcaggacagacggg
ccgcccatcctggcgtccggcagtcctcagggacacattgcattctgggatttggaccgc
cgtcagctggtcaaccagcagagacacgcccacagaacagctgtttctggagcttccttc
ctccacggagagccgctgttggtcaccaacggagccgataacgccatcaaggtgtggata
tttgatcaagatggaggcggagccagactgctgaggtgtcgtcagggccacagtgcccct
cccaccaccatctgtcaccatggcaatgatggaaagaacatcctgagtgcaggtcaggat
gggacactgcagtccttctccaccgtgcacgaacgtttcaacaagaacctgggtcacggc
tccatcaataagaagaaagagaagaagaagaagaaaggcctttcgtatgctgagctgaga
cttcctgccatcacagcgttggcttcagctgtcagtcgtcagtcggactgggacggtatc
gtggcgtgtcatcgaggtcggctgaccgccaccacctggaactaccagcgctgcaccatg
ggagctcaccagctgaagcccccggggtccaggagggacgccgtcgccacggccgtcgac
atcacttcctgtggaaacttcgccgtaatcggctcgtcttgcggccgtgttgacgtctac
aacctgcagtctgggctgcaccgtggttgctttggtgaccaagagacagctcacagtggc
gtggtgcgaggtgttgccacggacatgctgaaccagctgactctctcctgcggctctgat
tggctgctgaagttctggcgcttcaagacaaggaaacaggaagaggaagtgaagctgccg
gcggcagcggccagtctgaggctgcacagagacagtgggatggttgccgtggcgctggac
gacttcactctgcttgttgtcgacatggaaaccagacgagttgtcaggaagttcgcaggt
caccatggcaacatcacagacatgaccttcagtcctgatggacgctggctggttaccgtg
gcgatggactgcaccatccgtacctgggacctgccctctggatgtttggtggactgcttc
ctggttgccacggcaccagtgggcgtgtccctgtccccgacaggagacttcctggtgacg
gcccatgtggacagcctgggcgtttacctgtggtccaatcgcagcctgtgtgggcccgtg
gggctccgcccccttccagccgactaccagccggtggaggaggtgctgcccggcttcacc
gcagaggaggcagaacaggaagtgacatcagaagaggctgatgatgcgttccagtcagct
catcagctgggggcggagcttgtgacgctgtcactgctgccggagtctcgatggaaaagt
ctgctgcacctggacaccatcaagaagaggaacaagcctgtggcgccccctgctgctcca
cccaccgctcccttcttcctgcccacagttcctggtctcacgcctcgctttgagttgccc
gtggcaaccaaagaggacccacagtccaagctgctgtcctttggttggctggcccagagg
tcagacttcagctgtgctctggactcagcgctgcagtccggctccttcgagcagccgctg
cgcctcctgaaggactgtgggccggccgccatctctgtggagctcacctgtctgacatca
caggggggcggagacaacagcctgctgctggcctttatccacatgattgacagcatgctg
gccagtgggcgggacttcaacctggctcatgcttacctggcgctcttcctgcagctccac
ctgcacacggtgtcacaagatgctgttgtcatggcagcactgctccgcctctcctccagg
ctggaggcagggtgggcggagcttcaggcgtcgttcaaccagtctttgtgtttgctgtcc
tacacaaagagtgcactgctgtga
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