Austrofundulus limnaeus (annual killifish): 106536363
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Entry
106536363 CDS
T06063
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
alim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106536363
03015 mRNA surveillance pathway
106536363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106536363
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106536363
mRNA cycle factors
P-body specific factors
106536363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
pPIWI_RE_Y
Motif
Other DBs
NCBI-GeneID:
106536363
NCBI-ProteinID:
XP_013889075
UniProt:
A0A2I4DA10
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MDDKDVCSFVNKEKEKDREADRRXGSARDKAKDEAKASGKKDGGKEEKRKRLEEERKKKE
EKERRKKEEEKQKVEQEQKKKEEEEEEEKRNQEEQERKLQEEEAKRQREEEAALLKEKEE
GHQLHQEAWERHQSRKELRSRNQNAHESRPEEAFFSRLDSSLKKNTAFVKKLRTLTEQQR
DALSNDFASLNLSKYIGEAVSSVVEAKLKISDVGCAVHLCSLFHQRYGEFAPLLLQAWKR
HFEARREDKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKSIIGADRETHTHVS
VVISFCKHCGDDIAGLVPRRVKLAAEKFCLTFPPSEIISGEKQQPFQNLLREYFTSLTKH
LKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQTLADLLDENMPE
LPQDKTVQEEHGPGIDIFTPGKPGDYELEGGIWEDEDARNFYENLVDLKAFIPAILFKDN
EKSGQSKDKDEAKDGRDGKHAASATEELELELEALDITDEPLELEGGDEVESEELAKKLL
DEQEQEDEEANTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSNRRKLVRAL
FTVPRQRLDLLPFYSRLVATLHPCMSDVAEDLCSMLRGDFRFHIRKKDQINIETKNKTVR
FIGELAKFKMFSKTDTLHCLKMLLSDFTHHHIEMACTLLETCGRFLFRSPDSHLRTSVLL
EQMMRKKQAQHLDARYVTMVENAYYYCNPPPMEKAVKKKRPPLQEYIRKLLYKDLSKVTT
EKVLRQMRKLPWQEPEAKSYLICCMINIWNVKYNSIHCMANLLAGLVAYQEDVGIHVVDG
VLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLFSFTSFGVNQDGSPS
PLDPPEHLFRIRLVCTLLDTCGQYFDRGSSKKKLDCFLVYFQRYIWWKRSLDIWTKDHPF
PIDIDHMIRDTLEVLRPKMRLSCSLDEATKQVSDLEREVLVKLGMAMENNGRSSAMSEGE
ALDEEDDDDEEEGGAETEEQSGNESEMNEQEEDEASENEEEDREEEEEENTDYLTDSNKE
NETDEENNEVTIRGGGLKHVECPEDEDFIQALDKMMLENLQQRSGEAVKVHQLDVAIPLQ
LKSQLKKGGSGQQCAVEGDSDNSNTMQFVMLTRKGNKQQYKILNVPLSSHLAANHFNQQQ
AEQEERMRMKKLTLDINERQEQEDYQEMMQSLAQRPAPANTNRERRPRYQHPKGAPNADL
IFKTGGRKTKTRSERQAERDRQDELQGRQGHVSMSIRQTGGFQV
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaaagacgtttgctccttcgtcaacaaggaaaaggagaaggacagagaggca
gacaggaggcygggatccgcccgggacaaagccaaggacgaggccaaagcgagcgggaag
aaagacggcggcaaggaggagaagaggaagcgcctagaggaggagaggaagaagaaggag
gagaaggagcgaaggaagaaggaggaggaaaagcaaaaagtggagcaggagcagaagaag
aaggaggaggaagaggaggaggagaaaaggaatcaggaggagcaggagaggaagctgcaa
gaggaggaggccaaacggcagcgtgaggaggaggcggccctcctcaaagaaaaggaggag
gggcatcagctgcaccaggaagcctgggagcgycatcagtccagaaaggagctgcgcagc
aggaaccagaacgcccacgagagtcgtcccgaggaggccttcttcagccggctggactcc
agcctgaagaagaacacggccttcgtgaagaagctgcgcacgctgaccgagcagcagcgc
gacgcgctctccaaygacttcgcctccctcaacctcagcaagtacatcggcgaggccgtg
agctccgtggtggaggccaagctgaagatctcggacgtgggctgcgccgtgcacctgtgc
tccctcttccaccagcgctacggcgagttcgccccgctgctgctgcaggcctggaagagg
cacttcgaggccaggagggaggacaaggcgcccaacgtgagcaagctgcgcaccgacctg
cgcttcatcgccgagctcaccatcgtgggcctcttcaccgacaaggaggggctgtcgctg
atctacgagcagctgaagagcatcatcggcgcggaccgggagacgcacacgcacgtgtcg
gtggtcatcagcttctgcaagcactgcggcgacgacatcgccggcctcgtgccccgcagg
gtgaagctggcggccgagaagttctgcctgaccttccctccgagcgagatcatcagcggc
gagaagcagcagcccttccagaacctgctgagggagtacttcacctccctgaccaaacac
ctgaagaaggaccaccgcgagctgcagaacatcgagaggcagaaccggaggatcctacat
tccaaaggcgagctgagcgaggacagacacaagcagtatgaagagttcgccacgtcgtac
cagaagctgctggccaacacgcagacgctggccgacctgctggatgagaacatgccggag
ctgccgcaggataagaccgtgcaggaagagcacggccccggcatcgacatcttcacyccc
ggaaaacccggcgactacgagctggaggggggcatctgggaggacgaggacgctcgcaac
ttctacgagaacctggtggacctgaaggccttcattcccgccatcctcttcaaggacaac
gagaagagcggccagagcaaagacaaggacgaggccaaagacggcagggatggaaagcat
gctgcgagcgccacagaggagctggagctggagctggaagctctggacatcacagacgag
cctctggagctggaaggaggagacgaggtggagagtgaagagctggccaagaagctgctg
gatgaacaagaacaagaggacgaggaggcgaacacaggctcacacctgaagctgatcgtg
gacgccttcatccagcagctgcctaactgtgtcaacagagacctgatagacaaggctgcc
atggacttctgcatgaacatgaacaccaagtccaaccggaggaaactggtccgagccctg
ttcaccgtccccaggcagaggttggacctgctgccgttctactctcgcctggtggcgacg
ctgcacccctgcatgtcggacgtggccgaggatctgtgctccatgctgaggggagacttc
aggtttcatatccgtaagaaggaccagatcaacatcgagacgaagaataaaacggtgcgt
ttcatcggtgagttggccaagttcaagatgttctccaagacggacacgctgcactgtctg
aagatgctgctgtctgacttcacccatcaccacatcgagatggcgtgcacgctgctggag
acgtgcggccgcttcctgttccgctcgccggactcccacctgcgtacgagcgtcctgctg
gagcagatgatgcgtaaaaagcaggcgcagcaccttgacgcccgctacgtgaccatggtg
gagaacgcctactactactgcaacccgccgcccatggagaaggcggtgaagaagaagagg
ccgccgctgcaggagtacatcaggaagctgctctacaaggacctgtccaaggtgaccacg
gagaaggtgctgaggcagatgcgcaagctgccgtggcaggagccggaggcgaagagctac
ctgatctgctgcatgatcaacatctggaacgtcaagtacaacagcatccactgcatggcc
aacctgctggccggcctggtggcctaccaggaggacgtgggcatccacgtggtggacgga
gtgctggaggacatccgcctgggcatggaggtcaatcagcccaagttcaaccagcggcgg
atcagcagcgccaagttcctgggcgagctctacaactaccgcatggtggagtcggccgtc
atcttccgcaccctgttctccttcacctccttcggggtgaaccaggacggcagccccagc
cccctggaccccccggagcacctgttccggatccggctggtctgcaccctgctggacacc
tgcggccagtacttcgaccgcggctccagcaagaagaagctcgactgcttcctcgtgtac
ttccagaggtacatctggtggaaacggagcctggacatttggaccaaggaccacccgttc
cccatcgacatcgaccacatgatcagagacacgctggaggtgctccggcccaagatgagg
ctcagctgctcactggacgaggccaccaagcaggtgtcggacctggagagggaggtgctc
gtcaagctgggcatggccatggagaacaacggtcgctccagcgcaatgagcgaaggggag
gccctcgacgaggaggacgacgacgacgaggaagagggaggcgccgaaaccgaggagcag
tcgggcaacgagagcgaaatgaacgaacaggaagaggacgaagcatcggagaacgaagag
gaggacagggaggaagaggaggaggagaacacggactacctgactgactccaataaagaa
aacgagacggatgaggagaacaacgaggtcaccatccgtggcggtggactgaagcatgtg
gaatgtcctgaggacgaagacttcatccaggctctggataagatgatgctggagaacctg
cagcagcggagcggcgaggcagtgaaggtgcaccagctggacgtggccattcccctgcag
ctcaagagtcagctgaagaagggcgggtccggacagcagtgcgcagtggagggggactct
gacaactccaacaccatgcagttcgtcatgctgacacgcaaaggcaacaagcagcagtat
aagatcctgaacgtgcccctgtcgtcccacctggcagcgaatcacttcaaccagcagcag
gcggagcaggaggagcgcatgaggatgaagaaactgaccctggacatcaacgagaggcag
gagcaggaggactaccaggagatgatgcagtcgttggcgcagcgtccggctccggccaac
accaaccgcgagcgccggcctcgctaccagcacccgaagggtgcgcccaacgccgacctg
atcttcaagaccggaggaagaaagacaaagaccaggagtgagagacaggcagagagggac
aggcaggacgagctgcagggacgacagggacacgtctccatgtcgataagacagacagga
ggttttcaagtttaa
DBGET
integrated database retrieval system
