Austrofundulus limnaeus (annual killifish): 106536389
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Entry
106536389 CDS
T06063
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106536389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106536389
Membrane trafficking [BR:
alim04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106536389
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
106536389
RAVE complex
106536389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_VPS8
Beta-prop_WDR19_1st
TPR_GEMI5
NBCH_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
106536389
NCBI-ProteinID:
XP_013889111
UniProt:
A0A2I4DA44
LinkDB
All DBs
Position
Unknown
AA seq
2540 aa
AA seq
DB search
MYASTLTEGESAGTGEQGRMVQRVSRSASISASLGSTAISPSPKLRPGISPAVMMVSKHV
DGSLNQWAVTFAERSGFSNVLTVSHKIRYCGHRFHLNDQSCHTVLPLLLTSSHHNALLTP
PSAPSSMDGEQPPTFPLPKGLPRKRLRNSATRTFHDPNAIYSELILWRVDHIGPLSCTGG
VSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSSSACFVASDGKNLRLYQAVVDARK
LLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSNTQLLHVFQEDFILGY
KPQKEPEAFTPAFPTGEDFQPAPFSEKFFLVVIEKDLNRNSVLQMWHLHLQSVQACVDEP
SQHFNFQSQLMVPNQALNADSSPETSPIRPLPRSASSANLQSASKLILSSRLVYSRRLEL
PHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSYVRFWRCSVEGDDGGNEENQDS
RAYRWEPWVLMNEEEDNNSSVCVSGRPVAVSCSYIGRLAVAFKQPRHGQLHGSVEDFSMN
VSIYECESTGGSEWVLEQTVHLDDFVRPSSTLDPRVSVDSNLFVYSRSDLYMSRDHSSPN
IKHFIHLDWLSKEDGSHILTVGVGSNILMYGRISGVVSEQTSSKEGMAVITLPLGGSIKQ
GIRSRWVLLRSIDLLSSVDGTPSLPVSLSWVRDGILVVGMDCEMHVYAQWHQDKKPGEGE
EGNLSSADIAGGQTTGSSSVLEGRARSKSVFEGSAGMDEALRAPAGLQEGGLFEAAHSLS
PTLPQYHPTQLLELMDLGRVRRAKAILAHLVKCIAGEVAVVRDMEAGEGGSRRHLSRTIR
VTGSTAKDTMVAGRDGGRDYTEINSIPPLPLYALMLADLDTSYKGAEETTKVPKVSDGDA
THKSSEDQYADLFQVPTVTTDDFVNFATDKPEKKSRVINLSQYGPTYFGPEHAQVMSSHL
MHSSLPGLTRLEQMFLVALADTIATTSAEVTSSTDQQYTGGEALDECGLRYLLAMRLHTC
LLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAMQRGDAQWSDLRAVGVGWW
IRNINTLRKMVDKLGKAAFQRNNDPLDAALFYLAMKKKAVLWGLFRSQHDEKMTQFFKNN
FSEDRWRKAALKNAFSLLGKQRFEQAAAFFLLAGSLKDAIEVLMEKMEDLQLAMIVARLY
EADFEKSPTCQGLLYEKVLGCNRDGSGYHCSRLHPDPFLRSIAYWIMKDYTRALDTLLER
NPKEDENPDVMVKSCNPVVFSFYNYLRTHPLIIRRHFANPEGPATSVGLTAEKNSADEIN
LIERKLFFTTANAHFKVGCPVLALEVLSKIPKVSKKVGSSPVRTASSKANQPLENGTQGG
LDWDVPPTNTQAWGGNHSGGMDWSQPVVQVEEDELKLDWGDDKDDDDEEEEDGEGLTMKK
PEQESKADLKDGVSKLQRDDSQGDSEVDVIAEQLKFRACLKILMTELRTLATGFEVDGGK
LRFQLYSWLEKEIAAMHKICNYKVEGKEEESEVERGRTASIDISDEALECSEAGAYERHQ
MERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSLHGAKGGGVTSVRMELLFLLQESQQ
ETTVKQLQSPLPLPTTLPLLSACIAPTKTVIANPVLHLSNHIQDILYTITSMETPPHPDV
IDDRVNALHTLAASLSACVYQALCDSHSYSSQTEANQFTGMVYQGLLLSERKRLRTESIE
EHVTPNSAPAQWPGVSSLISLLTSAREEDQPRLSVLLCEAVVAVYLSLLIHGLGTHNSNE
LFRLAAHPLNNRMWAAVFGGGAKVVIKPKRPELLPATPPQPPAEDVDRYRRRFNMRMLVT
RQSVKETPATPPPVPTERPTYKEKFIPPELSMWDYFVAKPFLPLSDSNALYDSDESGAED
DEDDDAFLSDTQMTEHSDPNSYSWALIRLVMVKLAHHNVKNFIPLTGLDFTDLPVTSPLS
NAVVKTLENWEQLLLERMNKFDGPPPNYINTYPSDLSTGAGPAILRHKAMLEPDNTPFKT
KNLQSFPVRRLWHFMVKQEVLQETLIRYIFTKKRKQSESLENHVDRVNPDCIAGASSPYK
VVPFSVAAQARVLSVLLLQRIPAAPSLKEHMQEMFRKVVCDFGWQVEADLGYPGGKAKII
HKESDIIMAFAINKANSNEIVLASTHDVQEVDVSTLVAVQPYTWIGEDFDKESRSSDDID
PRSSHTNIAQASSVSFAPPPMAVSASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQ
YYMTGAQDGSVRMFEWNRPQQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVN
QTSSNPKPYLSWQCHSKACSDFAFITSSSLIATAGQSNDSRNVCMWDTLISPSNTMVHAF
PCHDNGATVLQYAQKQQLLISGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDPFEDF
FVTGSAEGNMKVWKLAGHGLMHSFSNEHAKQSIFRNIGAGVMKVETLPGNRIFTCGADGT
LKMRVLPDRYNIPSSLVDIL
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctccaccctgactgagggcgagagcgccggcacgggcgagcagggccgaatg
gtccaacgagtgtcccgctctgcttccatctcagccagcctgggttcaaccgccatctcc
ccgtcgccgaagctccgccccggcatcagtcctgccgtcatgatggtctccaaacatgtg
gacggatctctgaaccagtgggccgtgacgttcgccgagcgctccggcttctccaacgtt
ctgaccgtatcgcacaagatccgttactgcggccaccgtttccacctgaacgaccagtcg
tgtcacacggtgctgccgctgctgctcacctcctcccaccacaacgctctgctcaccccg
ccctccgcccccagcagcatggacggagagcagccgcccacctttcctctgcccaaagga
cttcccaggaaacgacttcgaaactccgctacacggaccttccacgaccccaacgccatt
tacagcgagctgattctgtggcgggtggaccacatcggtcctctgtcctgcaccggaggg
gtctctgaactggcccgcatcaactctttgcacacgtctgccttcagcaatgttgcttgg
ctgcctactctggtgcccagctctgtcctgggaacctactgtaacagctccagtgcctgc
ttcgtggcatcagatggtaaaaacctgcgactctatcaagctgtggttgatgccagaaaa
ctactggatgagctgtcagaccctgaaacatctaaactggtaggtgaggtgttcaacatt
gtgagccagcagtccactgccagacctggatgtatcatcgagttggacgtcatcacgaac
cagtgtggctccaacactcagctgctgcacgtcttccaggaggattttattttaggttac
aaacctcagaaagaaccagaggccttcacaccagcctttcccactggagaagattttcaa
cctgctccattttctgagaagttcttcctggtggtgatagagaaggatctgaacaggaac
tctgtcctgcagatgtggcacctgcacctgcagtctgtgcaggcctgtgtcgatgagccc
agtcaacattttaacttccagagtcagctgatggttcctaatcaagccctgaatgctgac
tcgtctccggagacgtctcccatcagacctctgccgcgctcagcgtcttcagctaactta
cagtcagcgagtaagctgatcctcagctccaggctggtgtacagcaggaggctggagctg
ccccacggggtggaggtcaccagagctacgccctctgcaggtcacctgagctcctcctcc
atctaccccgtgtgcctcgctccctacctgatcgtcaccacctgctccgactcctacgtg
aggttctggcgctgctccgtggagggagacgacggcggtaacgaggagaaccaggacagc
cgggcgtaccgctgggagccctgggttctgatgaacgaggaggaggacaacaacagttct
gtgtgcgtgtcgggtcgacccgtcgctgtgtcctgctcctacatcggcaggctggctgtg
gccttcaaacagcctcgccacggacagctgcatggctctgtagaggacttctccatgaat
gtgtccatctatgagtgtgagtccaccggtggctctgagtgggttctggagcaaactgtc
cacctggacgacttcgtcagaccctcatcgactctggatccaagagtcagcgtggattcc
aacctgtttgtgtacagcaggtctgacctgtacatgagcagagaccacagctcccccaac
attaagcacttcatccacctggactggctgtccaaagaggacgggtcccacatcctcacc
gtcggggtgggctccaacatcctcatgtacggacgcatctcaggggtggtcagtgagcag
accagcagcaaggagggcatggctgtcatcactctccctctagggggcagcatcaaacag
gggatccggtcccgctgggtcctgctgcgctccatagacctgctgtcgtccgtggatgga
acgccgtcgctgccggtgtccctgtcctgggtgagggatggaatcctggtggtgggcatg
gactgtgagatgcatgtgtacgcccagtggcaccaggacaagaagcccggcgagggagaa
gagggcaacctgtcgtctgcagacatcgctggaggtcaaaccaccggctcctcctcggtc
ctcgaggggagagcccggtccaagagtgtgttcgaaggcagcgctgggatggacgaagcc
ctccgagcccccgcaggactacaagaagggggactgtttgaagctgctcactccctgtcc
ccgacgctgccgcagtaccatccaacccagctgctggagctcatggacctgggccgggtc
cgccgggccaaggccatcctcgctcacctggtgaaatgcatcgctggagaggtagccgtg
gtgagagacatggaggcgggtgagggtggatcaaggagacatctttcccggacaatcagg
gtgactggcagcacggcgaaggacactatggtggccggccgcgacgggggcagggactac
actgagatcaactctatccctcctcttcctctctacgctctcatgttggccgacctggac
acctcctacaagggagcagaagagaccactaaggtccccaaggtgtctgatggtgacgca
acccacaagtcctcagaggaccagtacgccgatctcttccaggtgccaacagttaccact
gatgactttgtgaactttgctactgataaaccagagaagaaatccagagttattaacctc
tcccagtatggacccacttactttggaccagaacatgctcaggttatgtccagtcatctg
atgcactccagccttccaggactgaccaggctggagcagatgttcctggttgctttagca
gacaccatcgcaaccaccagtgctgaggtcaccagctccaccgatcagcagtacacaggt
ggcgaggctctggatgagtgtggactgaggtacctgctcgccatgcggctgcacacctgc
ctgctcacctctctgcccccgctgtaccgcatgcagctgctgcaccaggggctctctacg
tgccactttgcctgggccttccactccgaggcagaggaggagcttctgaacatgattcct
gccatgcagagaggcgacgcccagtggtccgacctcagagccgtgggggtgggctggtgg
atccgcaacatcaacacgctgcgcaaaatggtggacaagctgggtaaagctgcgttccag
aggaacaacgaccccttagatgctgctctcttctacttggccatgaagaagaaggccgtc
ctgtggggactcttcaggtctcagcatgatgagaagatgactcagttctttaagaataac
tttagtgaggaccgctggaggaaggcggctctgaaaaatgccttttccctgctgggaaag
cagcgctttgagcaggctgctgccttcttcctgttggctggttcccttaaagacgccata
gaggttctgatggaaaagatggaggatctccagctggccatgattgtagctcgactgtac
gaagcggactttgagaagtcgcccacctgccaaggcctcctttatgagaaggttctgggc
tgcaacagggacggcagcggttaccactgttccagactgcaccccgacccgttcctgcgc
agcatcgcctactggatcatgaaggattacacccgagccctggacaccctgttggaaagg
aaccctaaagaggacgagaatcctgatgtgatggtgaagtcctgcaaccccgtggtgttt
agcttctataactacttaagaacacatcctttaatcattcggcgccactttgctaatcca
gagggtccagcaacaagtgtgggcctgaccgcagagaaaaacagcgccgatgagatcaac
ctcatcgagcgcaaactcttcttcactactgccaacgcacacttcaaggtgggttgccca
gttttggctctagaagtgctctctaaaattcccaaagtcagtaagaaggtgggctcgtca
cctgtcaggacagcttcgtcgaaggccaaccagccgttagagaacggcacccagggaggc
ctcgactgggacgtcccgccaacaaacacccaggcctggggaggaaaccacagcgggggg
atggactggagccagccggtggtccaggtggaggaagacgagctgaaacttgactgggga
gacgataaggacgatgatgatgaggaggaggaggatggtgaaggtttgaccatgaagaaa
ccagagcaggagagcaaagcagacctgaaggatggtgtctccaaactgcagagagacgac
tcacagggtgactcagaggtggacgtgatcgcagagcagctgaagttccgtgcctgtctg
aagatcctgatgacggagctgcggacgctggcgacgggcttcgaagtggacggagggaag
ctgaggttccagctctacagctggctggagaaggagatcgctgccatgcacaagatctgt
aactacaaggtggaaggaaaggaggaggagtcagaggtggagcgaggccggacggcttct
atagacatatcggacgaggcactggagtgttctgaggccggagcgtacgagcgccatcag
atggagcgacggcgtctgcaggccaagcagcagcactcagagagacgtaaggcctggctg
aggaagaaccaggccctgctgagggtcttcctgtcctactgcagccttcatggagccaaa
ggagggggggtgacgtctgtccgcatggagctgctcttcctcctgcaggagagccagcag
gagacaacggtgaagcagctgcagtctcctcttcctctgcccaccacgctgcccctgctg
tcagcctgcatcgcccccaccaagacggtcatcgccaaccctgtcctccacctcagcaac
cacatccaggacatcctctacaccatcaccagcatggagacaccgccgcaccctgatgtc
atagatgaccgggtaaatgccctgcacacactggcagcctctctgtctgcgtgtgtctat
caggcactgtgtgacagccacagttacagcagtcagacggaggccaaccagtttacaggc
atggtgtaccagggcctgctgctcagtgagaggaagagactgaggacagaaagcatcgag
gaacatgtgactcctaactctgctcctgctcagtggccaggtgtgtcgtccctgatctcc
ctcctgacgtctgccagggaggaggaccagccacgcctcagcgtgcttctgtgtgaggcc
gtggtggccgtctatctctcgctgctcatccacggcctgggcacgcacaacagcaacgag
ctcttccgcctggcagcgcaccccctcaataatcgcatgtgggctgccgtgtttggaggc
ggagctaaagtcgtcatcaaaccaaagagacctgagctcctaccagccacgcccccccag
cctccagcagaagacgtggaccggtacagacgcaggttcaacatgaggatgctggtcacc
aggcagtctgtgaaggagacccccgccaccccaccccccgtgcccacagagagacccacc
tacaaggagaagttcatccctcctgagctcagcatgtgggattacttcgtagctaaaccc
ttcctgccactgtccgacagcaacgccttgtacgactcagacgaaagtggagctgaggat
gatgaagatgacgacgccttcctctctgacacacagatgacagagcattctgaccccaac
tcctacagctgggctttgatccgcctggtcatggtgaaactggctcaccacaacgtgaag
aacttcatccccctcacgggtctggacttcacagaccttccagtcacgtctcctctcagc
aacgctgtggttaagactttagagaactgggagcagcttctgctggagcgcatgaacaag
ttcgacggtccgcctccgaactacatcaacacttaccccagtgacctgagcacaggagct
ggacccgccatcctgaggcacaaggccatgctggagccagacaacacgccgttcaagaca
aagaaccttcagtccttcccggttcgacgtctttggcattttatggtcaaacaggaagtt
cttcaggaaacgttgatccgttacatctttactaagaaaaggaagcagagtgagtcttta
gaaaaccatgtggaccgtgtaaacccagactgcatagccggagctagcagtccctataag
gtagtaccgttttctgtggcggcccaggcccgggttctgtctgtcctgctgctgcagaga
atccctgcagcgccaagcttgaaggagcacatgcaggaaatgttcagaaaagtagtgtgc
gactttggttggcaggtggaggcagatctgggctatcctggaggaaaggctaaaatcatc
cacaaagagtctgatataattatggcttttgccatcaataaggccaactccaacgagatc
gtgttagcctccacccacgacgtccaggaggtggatgtgtccacgttagtggccgtccag
ccctacacctggatcggagaagactttgataaggagtcccgaagctccgacgacatcgac
cctcgttcctctcacaccaacatcgcccaggccagctcggtctccttcgcccctccaccc
atggcggtctctgcgtccatgccgtggctcgggagcgggcagaccagcatgggggccagc
gtgattatgaagaggaacctaaataatgtgaagaggatgacgtctcatcctatatatcag
tattacatgacgggcgctcaggacggcagtgtgagaatgtttgagtggaacagacctcag
cagctcatctgcttcagacaagcaggaaacgctcgagtcacccgactttactttaactcc
caaggcaataagtgtggagttgctgatggagaaggattcctgagtctctggcaggtcaac
cagacgtcctccaaccccaaaccatacctgagctggcagtgtcactctaaggcctgcagt
gattttgccttcatcacgtcctccagcctgatcgccacagccggacagtccaacgacagc
agaaacgtctgcatgtgggacactctgatctctcccagcaacaccatggtccacgccttc
ccttgccatgacaacggcgccacggtgcttcagtacgctcagaagcagcagctgctgatc
tctggaggcaggaagggcttcgtgtgtgtgttcgacatccgccagcggcagctgctgcac
accttccaggcccacgactctgccatcaaggccctcgctctggaccccttcgaggacttc
ttcgtcaccggctctgcagagggcaacatgaaggtgtggaagttagctggccacggcctc
atgcactcgttcagcaacgaacacgccaagcagtccatcttcaggaacatcggcgccggc
gtgatgaaggtggagactcttcccgggaaccggatcttcacctgcggagcggacggcacc
ctgaagatgagggtcctccctgaccgctacaatattcccagcagcttagtcgacatcctg
taa
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integrated database retrieval system
