Austrofundulus limnaeus (annual killifish): 106536542
Help
Entry
106536542 CDS
T06063
Name
(RefSeq) TOX high mobility group box family member 3-like isoform X1
KO
K28489
thymocyte selection-associated high mobility group box protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106536542
Transcription factors [BR:
alim03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
106536542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106536542
NCBI-ProteinID:
XP_013889297
UniProt:
A0A2I4DAN7
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MDVRFYPTAGGNSIPGEPPNLDFAHCLGYYNFNKFQNNNNYMNMAEANGALLAAGDTFHT
PSLGDEEFEIPPITPPPETESSLGPEVNSPFPAMPEPPAPHRGPIIPQFPPQSLDLPSIT
ISRNMMDQEGVSVNNGQPVNVGPGHIRQYPTNPSMVMKSIINMNSPNGMMSRNQLTTINQ
SQLNAQLSLNMAGPNITHTSPSPPASKSATPSPSSSINEDDQDDSNRVIGEKRPAPIDPA
KKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGE
EQKQVYKSKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRTVQQTLASTSLSPGLVL
PSPLNQHPNMPSASQALQQALPRAIAPKPLQMRLGGSQIVTSVTVSHQNMSSGMPPQMLG
QMGAGGAMVAGVQSTAVSQMSPPMQSVQQHAMQQLQQQQQQQQMQQQLQHHQMQQQQMHH
QQIQQQMQHQHFQHHLQQQLQQHHMQQQQQQQQQQMQLQHMQMQHQLHQQQIQHLQQQQQ
QQQQQQQQQQQQQQHQSQCSPPQHSPGTPHSVGGSASLGSPQPAPQQQPHPSQIQAHAQV
LSQMQLFKSTHCEGSVIFEDRVKPCQKCRQRLRRRRRTGSKRSLDTVIWMND
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaggttttacccgactgctggggggaattctatcccgggagagccacccaac
ctggattttgcccactgtttgggctactacaacttcaataagttccagaataacaacaac
tacatgaacatggctgaggcaaatggtgctctgcttgctgctggcgatactttccatacg
cccagcttgggggacgaggagtttgagattcctcccatcacgcctccacctgagacagaa
tccagtcttggaccagaggtgaactcaccattcccagcaatgccagaaccccctgctcca
cacaggggtccaataatccctcagttccccccacagagtctagatctgccctcgattacc
atctcacgcaacatgatggaccaagaaggggtgtctgtcaacaacggccagcctgtgaat
gtcgggccgggtcatatacgtcagtacccaaccaatccctccatggtgatgaagtcaatc
atcaacatgaacagtcccaacgggatgatgtcacggaaccagctgaccaccattaaccag
tcccagctcaatgcacagctgagtttaaacatggcaggacctaacatcacccatacgtcc
ccatcaccaccggccagcaagtccgccacaccctcgccctccagctccatcaacgaagac
gaccaggacgacagcaacagggtaattggagaaaagcgaccagccccaattgatccrgcg
aaaaaacccaagactcctaagaagaaaaagaagaaggatcctaatgagccccaaaagcca
gtgtcagcttatgccctgttcttcagagacacccaggctgcgatcaagggccagaatccc
aatgcwacttttggagaagtgtctaagattgtagcatctatgtgggatggccttggggag
gaacagaaacaggtttataaaagcaaaacagaagctgccaagaaagaatatctgaaagct
cttgctgcatatcgcgctagcctggtttctaaggctgcagcagaatcagctgaggcccag
acaattcgaacagttcaacagaccctggcctccaccagcttgtctccaggactygtgctg
ccgtcacccctcaaccagcaccctaacatgccatcagcctcccaggccctgcaacaagct
ttgcctcgagccatcgccccaaaacctctgcagatgagacttgggggcagccagattgtg
acctcggtcacagtatcccaccagaacatgtcctctgggatgccaccacaaatgcttggc
cagatgggtgctggaggagccatggtggcgggtgttcagtccacagcggtgtcccagatg
agtccacccatgcagtcggtgcaacagcatgccatgcagcagctccagcagcagcagcag
cagcagcagatgcaacagcagctccagcatcatcagatgcagcagcaacagatgcatcac
caacaaatccagcagcagatgcagcatcagcattttcagcatcaccttcagcagcaactg
cagcagcaccacatgcagcagcagcagcaacaacaacagcagcagatgcaactgcagcac
atgcagatgcaacatcaactgcatcagcagcagattcaacatctccagcagcagcagcaa
caacagcagcagcagcagcagcagcagcaacaacaacagcagcaccaatcccagtgttcc
ccacctcagcactctcctggtaccccccactcagtaggaggctctgcatccctcggcagc
ccccagccagctccccagcagcagccacacccttcccaaatccaggcccatgcccaggtc
ctgtcccagatgcaactgttcaaatctacacactgtgaaggctcagtgatatttgaagac
agagtcaaaccatgtcaaaaatgcagacaacgtctcagacgaaggaggagaactggaagt
aaaaggtctttggacacagttatatggatgaatgactga
DBGET
integrated database retrieval system
