Austrofundulus limnaeus (annual killifish): 106536720
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Entry
106536720 CDS
T06063
Name
(RefSeq) vacuolar protein sorting-associated protein 13C-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106536720
Membrane trafficking [BR:
alim04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106536720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_C
PDZD8_N
Motif
Other DBs
NCBI-GeneID:
106536720
NCBI-ProteinID:
XP_013889490
UniProt:
A0A2I4DB63
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MEVNLNTAVMMMRQPHSCPIRRNFLSGIQVEFKQSMHQRSLRAQLHWLQVDNQLLGAMFP
IVFHPVPPPKSIALDSEPKPFIDISVITRFNQHTNVTQFKYFMALVQEMAVKIDQDFLEA
VLALFTPDADPQTDRMKTGLIDRDLQRLQAEPTDVSQSDASGFSFFEYFHISPIKLHLSL
TLSSSDDSSAKKSVALQPLKLLLKSIGATLTNVDDIIFKLAFFEVKYQFYSREKLMWAVG
QHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPFQGAVQGPEEFAEGFVIG
VRSLLGHTVGGAAGMVSKITGSVGKGLAAITMDKQYQQERREEMNRAPKDFKGSLAKGGK
GLLKGVVGGVTGIVTKPVEGAKKEGAAGFFKGIGKGLVGVVARPTGGIVDMASSTFQGIQ
RAAESTEEVTKLRPVRLIKEDGIIRPFDLTESQGLDLFQRSGIKPLEGEVFRSFCPHPGH
KKTNIIVTNRRVFCVKEMDFVGHFITDWECLYENFNGPPAVVGSELKIYCTEQQKLKLTK
HQDSVRTIQLIDPTVAQNLHKAICEAEVAQQQHRMVRQKSQRFLRLSKKQ
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaacttgaatacagcggtaatgatgatgcgtcagccccattcctgcccaatc
agaaggaacttcctgtctgggatccaggtggagttcaagcagtcgatgcaccagcgcagc
ctgagagcacagctgcactggctgcaggtggacaaccagctgctgggtgccatgttcccc
atcgtcttccatccagttcctcctcccaagtccatcgctctggactcagaaccaaaaccg
ttcatcgacatttcggtcatcaccaggttcaaccagcacactaatgtcacacagtttaag
tacttcatggctctggttcaggagatggcagtgaagattgatcaagatttcctggaagcc
gtcctggctctgtttacaccagatgctgaccctcaaactgacagaatgaagacggggctg
atcgacagagatctgcagcgcctgcaggccgagcccacagacgtgtctcagtccgacgca
tcaggattcagcttctttgaatatttccacatctcacccatcaagctccacctcagtctg
actctcagctccagtgacgacagctcagctaagaagtccgttgctcttcagcctctgaag
ctgctgttaaaaagcatcggcgccacgctgaccaacgtggacgacatcatctttaaactg
gccttcttcgaggtgaagtaccagttctacagcagggagaagctgatgtgggccgtgggc
caacattacagtgaacagttcctgaagcaaatgtatgttctggttctgggtctggatgtt
ctggggaacccgtttggactgatccgaggtctgtctgagggagtggaggccttcttctac
gagccattccagggagctgttcagggaccggaggagttcgctgaaggatttgtaatcggt
gttcggagcctgttgggtcacactgtgggtggggccgcaggtatggtctccaagatcaca
ggttctgtggggaaaggcctggcagccataaccatggataagcagtaccagcaggagcgg
cgggaggagatgaaccgagcacctaaagacttcaagggcagtctggctaaaggagggaaa
ggactgctgaagggcgtcgttggtggagttacaggcatcgtcaccaaacctgtggaagga
gctaagaaggagggggcagcagggttctttaaggggattggtaagggtcttgtgggtgtt
gttgcccgacccacgggtggtattgtggacatggccagcagcaccttccagggaatccag
agagcygcagagtcgacggaggaagtgaccaaactccggccggtccgtctgatcaaggag
gacgggatcatccgcccgtttgacctgaccgagtctcagggtctggacctgttccagcgc
tcaggaatcaaaccactggagggtgaagtgttcagaagcttctgtccacatcctggtcac
aaaaagaccaacatcatcgtcaccaacaggagggtgttttgtgtgaaggagatggatttt
gtgggtcactttatcaccgactgggaatgtttgtacgagaacttcaatggtcctcctgct
gtggtgggatcagagctgaagatttactgcacggaacagcagaagttgaaacttacaaaa
catcaggactcggtcagaaccatccaactcatagacccaacggttgcacagaacctacac
aaggccatatgtgaggctgaggtggcccagcagcagcaccgcatggtgagacagaagtcc
cagcgcttcctgaggctcagcaagaagcagtga
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