Austrofundulus limnaeus (annual killifish): 106536777
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Entry
106536777 CDS
T06063
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
106536777
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106536777
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106536777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
106536777
NCBI-ProteinID:
XP_013889560
UniProt:
A0A2I4DBE0
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MFNWVVKVVPQPAESPGSNETTKTTPADLVKNNEAKTQKKTEEVLENGQNNTGVISWLSN
GFVSALPQPPASPLLSSDTRSGEDGERSGVIGWVTQGLTKVLPQPDEKYRDTNDNKKSSE
ELTEVYDVATMPEFDPLPHIPVVEVVSEDEEVEEESLTSQFTPRVKNWIKQIIPQPMMPP
GTVPSEPPPKASRSSIDKILSPPPESLSGISLDTDGKASGVVDWFVSGLGLKMPQLVVPP
KDDPEAPTEVLQKASSKLKPDLVLEDVESDNEGQQRCVSAPPNSLSPHSVTMSPHSVTMS
PHSVTMQQQQQETQKKAEAPTSESVTKISQEDAETQTGRWTPFIESIKREAEDVALATME
ERLLQERMEMARLAEEVARQTAEMAVRQMASEGTSIKLSLESQELLVEPEEELPVMEEEE
NKEEEKEDTEKEETQSQDEHKVEAEELTVKEPEPEQEEAPKETSSILPPSLEPGKDSEPE
PPEPKTEEDHSTAQPVTQQPQKTDDGQINTDTTAGKEEEAPGDDCGESTGVNLRPAVNVE
DVDHEKGGAGGGEEKSDTSQKLTPQDPKLTTLTVPVTPSGGRQSKGDKDIGRNRRNVWTK
IRQLHSQSEEDDEDLSIPVRAWPSQSSLYSSDDVHKERPASAASQTSAVVNERLQELVRM
FKERTEKAKEKLVDPDSSDEESVIVTSHPQPPAPHSAPEAAPSDVEEEEGVSASGGESEE
EKMSGSCCKVKTPGWIRACRRLRFPASIDPFTNLMYVLWMFLVSLAWNWNVWLIPVRWAF
PYQTSDNIYYWLLIDYLCDLIYILDISVFQPRLQFICGGDIVSDKKEMRKNYMKTKRFKF
DVASLVPLELFYFITGINPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTAYLLY
CLHCNACLYHWTSTYIGLGATQWVYNGDGNSYVRCYYFAVKTLITIGGLPDPTSLFEIVF
QLINYFVGVFAFSIMIGQMRDVVGAATAAQTYYRTCMDNTIKYMTSYRIPKDVQNRVKTW
YNYTWQSQGMLDEQELLTQLPDKMRLDIAVDVNYSIVSKVPLFQGCDRQMIFDMLKSLRS
VVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDDRTVFATLRAGSVFGEISLLAVGGVN
RRTANVIAHGFANLFILDKKDLNEILVHYPESKKLLRKKARKMLNKGKKPEAKEEAKESP
QAAAAAPLRSETPKLLRAALEMTEKSSGLKGVLAKVKEKTNKSNITLQPFPSPSIRPASP
SPSCEPDGDVDTLSSVSPGSMTFRSASQCCDPEGPPSMQFEKDXSEDEWDEGGKK
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggttcctcaacctgcagaatctccrgggtctaatgaa
accaccaagaccacccctgctgatctcgtgaagaacaacgaggcgaagacacagaaaaag
acagaagaagttttggagaatggtcagaacaacaccggagtgatcagctggctgtccaac
gggttcgtcagcgccctgccgcagccccctgcrtcccctctgctcagctcagacacccgg
tcaggggaggacggagaaaggtccggagtcatcggctgggtcactcagggtctgaccaaa
gttctgcctcagcctgatgagaagtacagagatactaaygacaacaaaaagtcctcagaa
gaactcacagaggtgtacgacgtagcgacaatgccagaattcgaccctcttccacacatc
cccgtggtggaggtggtttcagaggacgaggaggtggaagaggagagtttgacctctcag
tttacgcccagagtgaagaactggataaaacagataatccctcagcccatgatgccccct
ggtaccgtaccctcagagccaccacccaaagcctcccgttcttccattgataaaattctt
tctccaccacctgaatctctcagtgggatctcactggatactgatggcaaggcctctggt
gtggtggactggtttgtgtcaggactgggtctgaagatgcctcagcttgttgttccacct
aaagatgaccctgaggctccaactgaagtcctacagaaagcttcatccaaactcaaacca
gacttggtgctggaggacgtggagtcggacaacgagggccagcagagatgtgtttcagcc
ccgcctaattccttgagtccacattcagtcacaatgagtccacattcagtcacaatgagt
ccacattcagtcacaatgcagcaacagcaacaagaaacacagaagaaggctgaggcgcca
acgtcggagagcgtgacgaagatttctcaagaagatgctgagacgcagaccggccgctgg
acgccgtttatcgaaagcatcaaaagggaggctgaagatgtggctttagccactatggaa
gaacggctgctccaggagcggatggaaatggcccgtctggctgaagaggtggcccggcag
acagcagagatggccgtcaggcagatggccagcgagggaacctccatcaaactctcactg
gagagtcaggagctgctggtggagcctgaagaagagttaccagtgatggaagaagaagaa
aacaaagaggaggagaaggaagacacagaaaaggaagaaactcaatctcaggacgagcat
aaagttgaggccgaggagctgactgtcaaggaaccagagccagagcaggaagaagctcca
aaagagacctcatccattctgcctccaagtcttgaaccaggaaaggattcagagccagaa
ccaccagaacctaagaccgaggaagaccattcaacagctcagccggtgactcagcagccc
cagaaaacagatgacggtcaaatcaacaccgacacgactgctggaaaagaagaagaagct
cctggtgatgactgtggtgagagcaccggcgtcaacctccgcccggccgtaaacgtagaa
gatgtcgatcacgagaaagggggagcaggaggaggcgaggagaagagcgacacctcccaa
aaactcacccctcaggacccaaaacttacaaccctcacagtccccgtgaccccgtcagga
ggccgtcagagtaaaggagataaagacatcggcaggaaccgtaggaacgtctggaccaag
atcaggcagctacattctcaaagcgaagaagatgatgaagatctgagcatcccagtcaga
gcctggcccagtcagtccagcctgtacagctccgatgacgtccacaaagagcgtccggcc
tccgcagccagccagaccagcgcggtggtcaacgagcggctgcaggaactggtccggatg
ttcaaagagaggacggagaaggccaaggagaagctcgtcgacccagacagctctgatgaa
gagagcgtcatcgtcacttctcatcctcagcctccagctcctcattcggctcctgaagct
gcgccgtcggatgtggaggaagaggagggtgtgtcggcatcaggaggagagagcgaggag
gagaagatgtctggaagctgctgcaaggtgaaaactcctggctggatacgagcctgcagg
cgcctccgcttccctgccagcatcgaccccttcaccaacttgatgtacgtcctctggatg
ttcttggtgtctctggcctggaactggaacgtgtggttgatcccggtccgctgggccttc
ccgtaccagacctcagataatatttactactggcttctgatcgactacctctgcgatctc
atttacatcttggacatctccgtcttccagccgcgcctgcagtttatttgtggaggtgac
atagtgagtgacaaaaaagagatgagaaagaattacatgaaaaccaaacgcttcaagttt
gacgtagccagcctggttcccttggagctcttttatttcattactggcatcaaccctctg
cttcgtttaccgaggctgctgaagatcaactctttctttgagttcaatgagcgtctagag
gccatcttgaccaaagcctacatttacagggtgatccgtaccaccgcatatcttctctac
tgtcttcactgcaacgcctgcctctaccactggacctcgacctacatcggactgggggct
acccagtgggtctacaacggcgatggcaacagttacgttcgatgttactactttgcggtt
aaaactctgattacaatcggaggtctgccggaccccacctccctcttcgagatcgtcttc
cagctaatcaactactttgttggagtctttgccttctcaatcatgattggacaaatgcgt
gacgtggttggtgcagccacagcagctcaaacctactaccgcacctgtatggacaacact
attaaatacatgacatcctatcgcatccctaaagatgtccagaaccgagtcaaaacctgg
tacaactatacctggcagtctcaaggcatgctggatgagcaggaactgctgactcagctg
ccagataaaatgcgtctggacattgctgtagatgtcaactactccattgtgagcaaagtc
cctctttttcagggttgtgacagacagatgatttttgacatgctcaaaagccttcgttct
gtcgtctacctgcccggtgattatgtctgcaaaaagggtgaggtgggccgggagatgtac
atcataaaagcaggggaggtgcaggtggtcggaggacctgatgacaggacggtgttcgcc
actctcagagcaggatcggtctttggagagatcagtttgcttgcagtcggtggagttaac
aggcgcacagccaatgtgatcgctcacggctttgccaatctgttcatcctggacaaaaaa
gacctgaatgagattctggtccactaccccgagtcgaagaaactgctccgcaagaaagcy
aggaagatgcttaacaaagggaagaagcccgaagccaaagaagaggctaaggaatctcct
caggcggcagcagcagcacctctcaggtcggagactcccaaactgctcagagcrgccctt
gagatgaccgagaaatcgtctggactcaaaggagttctagccaaagtcaaagagaagacc
aacaagtccaatatcacgttacagccgttcccgtccccctccatacgtcctgcatctcca
tcgcccagctgtgaacccgacggagacgtggacacgctgtcgtctgtctctccgggctcc
atgacttttcgctcggcctctcagtgctgcgaccctgaaggacctccgtccatgcagttc
gaaaaggacrtcagtgaggacgagtgggatgagggagggaagaagtga
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