Austrofundulus limnaeus (annual killifish): 106536840
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Entry
106536840 CDS
T06063
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106536840
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106536840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_4
zf-CCCH_2
PRORP
Motif
Other DBs
NCBI-GeneID:
106536840
NCBI-ProteinID:
XP_013889629
UniProt:
A0A2I4DBK8
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MGQKDHVEPGAGHILHSGSDLEYLHVVGADRQAGSADGPPAMEEQGATSDSTSSPLLARL
EESGGSGGEGEPAPSSGSAHAAGRDSDGGEGTCSKNTHQPLCRTPCVDLGTDGPPEPPFE
LSAEDDHDPPEPAPPASEPVSESRGKAYQAKLDFALKLGYSEETVHLVLSKLGPDTLIND
ILGELVKLGNKSDSEQPVGILTSASSTSSSASSCGCSDVLDGQXSDSPCSSDSVCDQDNL
RPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFQERGHQNITVFVPAWRKEQSRPDAPITD
QEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPE
WKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEQKKQPCPYGKKCTYG
HKCKYYHPERGAQPQRAVADELRASAKTCVPSKNQGDAGLVKSHSVPAGTIEAKKGAPKR
QSDPSIRALSYSDAEEKLLAKGHRSSLCGSSNSSSSGSLSQSPALAGPPPGLSLPQDQQP
RAVTHLPAPSHELYPHCESPDISYYSVTRAYSGLSLTSRRSPDCRFTGDSDLRHGSVGSA
GSECGSESSVSCSSSCDSYTERSCPGCPPDPLLEDSVHLAAPHSRLYPPHVPSSHELCSL
HAAEYQSGPHATYHLTCGQSCIHDQPPLEAPSKRPLYPLPPHLQHQPLSARSSCPGDYHS
LPQSNRQPPSSPLGRCLAPTRAESVSDSHLYEHLSTHHHHRQKAALSWDPYYRQPPLPPP
RYESSTYQSLPDTRQSAWHAPPWPPEGYAQHHSSHPALHPSPTHYLSHPPPPPHSPHPPY
SSHLTLPSHAPPPYVPQHPESPAHGRYEDVREKVYINLCNIFPSELVSRVMARNPHITDP
QQLAAAILAEKAQTGY
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaggaccatgtggagccaggagcaggccacattctccactcggggtcggac
ttggagtatctccatgtagtgggggcagaccggcaagctggcagcgctgacgggcctcct
gctatggaggagcagggggcgacctccgacagcaccagttcccctctgctggcccggctg
gaagaaagcggcgggtctggaggggagggcgagccggcgccgtcctccggctctgctcac
gctgcaggcagggactcagacggaggagagggtacatgtagcaaaaacacccaccagccg
ctgtgccggaccccgtgtgttgacctaggcaccgacggacctcctgaacccccgtttgaa
ctttcagctgaggatgaccatgacccgcctgaacctgcgcctcctgcgtctgaaccagtg
tctgagagcagagggaaggcctaccaggccaagctggactttgccctgaagctgggctac
tctgaagagacggtgcaccttgtgctgtccaagctgggccccgacaccctcatcaacgac
atattgggagaactggtcaaactgggcaacaagtccgacagcgagcagccggtcgggata
ttgacctctgcctcatccacctcctcttcggcctcctcgtgcgggtgctccgatgttctg
gacgggcagrgctcggactcaccctgctcctcggattcggtctgtgaccaggacaacctg
cggccggtcgtggtggacggcagcaacgtggccatgagccacggcaacaaggaggtgttt
tcctgtcagggcatccagctggctgtggattggttccaggagcgaggtcatcaaaacatc
actgtttttgttcctgcgtggaggaaagagcagtcccgccccgacgccccgataacagat
caggagattttgcgtcgcctcgagaaggaaaaaatcctcgtcttcactccctcgcggcgc
gtccaaggccgccgcgtggtctgctatgacgaccgcttcattgtcaaactggcgtatgag
tcagacggcatcatcgtctccaatgacaactacagggacctggctaacgagaagcccgag
tggaagaagttcatagatgagcgtctgctcatgtattcctttgtcaatgacaaattcatg
ccaccagatgatcctctgggtcgacacgggcccagtttagacaacttcctgagaaagaag
cctgttgtgcctgagcagaagaagcagccctgtccatatgggaagaagtgcacctacggc
cacaagtgtaaatactaccaccctgaaagaggggctcagcctcagagagctgtggccgat
gagctgcgtgccagcgccaagacctgcgtcccctccaaaaatcagggggatgcgggactc
gtgaagagtcacagtgtgccagctggcaccatcgaagcgaagaaaggcgcccccaaaaga
caatcggaccccagcatccgagctctgtcgtatagcgacgccgaggagaagctgctggct
aaaggccacaggagcagcttgtgtgggagcagcaacagcagctccagcgggagtttaagc
cagtctccggccctggcaggacccccaccgggcctcagcctgccgcaggatcaacaaccc
agagcggtgacacacctaccagccccaagtcatgagctgtaccctcactgcgagtctcca
gacataagctactactctgtaacacgagcgtactccggcctgagcctcacgtcccgacgg
agcccagactgccgcttcacgggggactcggacctgcggcacggctcagtgggctcagcg
ggctctgagtgtggcagtgagagtagcgtcagttgcagcagcagctgcgactcttacact
gagagatcctgtcctggatgtcctccagaccctttactggaggacagcgttcatttggct
gccccccacagccgcctgtatcccccccatgtcccgtccagccacgagctgtgttctctg
catgctgctgagtaccagagtggtccacacgccacctaccacctgacctgtgggcagagc
tgcatccacgaccagcctccacttgaagctccctccaagcgacccctctaccccctgccc
ccccacctccagcaccagcctctatctgcccgctccagctgcccaggcgactaccactcc
ctgccccagtccaaccgccagccccccagctctcctctcggccgctgcctggcgccgaca
cgagccgaaagcgtgtccgactcccacctgtacgagcatctctccacacaccaccaccac
agacagaaagccgcactcagctgggacccgtactaccggcagccccccctgcccccaccc
aggtacgagtcctccacctatcagagcctgccggacacgcggcagtcagcctggcacgcc
ccgccgtggccaccggagggctacgcccagcaccactcctctcacccagccctccacccg
tcacccacacattacctcagccaccctcctcctcctcctcactccccccacccaccttac
agctcccacctgacacttccctcccacgctcctccaccctacgtcccgcagcaccccgag
tccccggcgcacggccgctacgaggacgtgagggagaaggtgtacataaacctgtgcaac
atcttcccctcagagctggtgagccgggtcatggccaggaacccccacatcacggacccc
cagcagctggctgctgccatcctcgcagagaaagctcaaactggctactga
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