Austrofundulus limnaeus (annual killifish): 106536854
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Entry
106536854 CDS
T06063
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alim01002
]
106536854
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106536854
Enzymes [BR:
alim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106536854
Peptidases and inhibitors [BR:
alim01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106536854
Ubiquitin system [BR:
alim04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106536854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
106536854
NCBI-ProteinID:
XP_013889645
UniProt:
A0A2I4DBM6
LinkDB
All DBs
Position
Unknown
AA seq
2613 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQSQAPDAQSQPPLPQNQTSSPNSSNENSPISPPDEQAQVDGPH
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLADDELYARPPDPRSPKGWLVDLINKFGTLNGFQILH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLPKKIPINIHTNL
VSQTTRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQLSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCRAGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLSLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHPRYISFLWQIADLGCNLNMPQLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIPVS
PINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRA
VQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPT
ALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVL
GSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETG
VEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIRELIDDFIFPASNVYLQYMKSG
EFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQMVDTLTDMYYLGCETLTEWEYLP
PVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQE
NESNVDPRDEVFCYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPPMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVI
QQNELSEATAPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTE
CKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVK
YISELSLSSTKPHQVKMPSVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNP
PPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRY
WFAHNVLFAYPNRFSEYLLECPSAEVRGALAKLIVFIAHFSLQDGPCPSPTASPGPSAQG
CDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFM
LVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLQNPYGDPNLTA
PVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVA
YSYTYELRPXLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQ
CIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPV
QSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSPPEDT
SLYPHSPGTTQFQQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQTQTPTPGPST
TPGSGPRAQENWEGTEEVAPAPSSTPAPTPPKE
NT seq
7842 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccacgcgtggctctccggtggggggcaatgacagtcagggccagagccag
gcacctgatgctcagagccaaccccctctgccacagaaccagacatcatctcccaactca
tcaaatgagaactctccaattagcccaccagatgaacaggctcaggtggatgggccccat
cagctggaagaggaagagccagcttttcctcacactgacctagccaagcttgatgacatg
atcaacaggcctcgatgggtcgttccagttttgccaaaaggagagttagaagtcctcttg
gaagctgctatagatctgagtaaaaaaggactggatgtgaaatgtgaggcatgtcagagg
tttttccgggatgggttaaccatttccttcacaaaaatcttgacagatgaggcggtcagt
ggatggaagtttgaaatacataggtgcatcatcaataacacacaccggctgatcgagctg
tgtgtggccaagctctctcaggactggttcccactactggagctgctggccatggccacc
aacccccactgcaagttccatatctacaacggcacacggccctctgagaccgtacctgct
ggagcacagctagctgacgacgagctgtacgctcgcccaccagacccacgttctcctaag
ggctggctggttgatttaataaacaaatttggcacattaaacgggtttcaaattttgcac
gatcgcttcatgagtggccaagcactgaacgtccagatcatcgctgcacttatcaaacct
tttggccagtgttatgagttcctcacgttgcacacagtaaagaaatacttccttccagtc
atcgaaatggttcctcagtttctagagaatcttacagatgaggagctaaagaaagaggcc
aagaatgaagccaaaaatgatgcactgtccatgataatcaagtctttaaagaatctggct
tcccgtgtaccagggcaggaggagacggtgaagaatttagagatttttaggttaaaaatg
attcttaggttattgcaaatttcctcttttaacggcaaaatgaatgcactaaatgaagtt
aataaagtgatctccagtgtgtcgtactacactcatcgacataaccctgaagaggaggag
tggcttactgcagagcgcatggctgaatggatccagcagaaccacatcctttccattgtt
ctgagggacagtttgcatcagccgcagtatgtggagaaacttgaaaaaatccttcgattt
gtcataaaagagaaggctcttaccatgcaagacttggacaacatctgggctgcacaggct
ggtaagcatgaggccattgtgaagaacgttcatgaccttttggccaaattggcgtgggac
ttctcacctgagcagcttgatcatctttttgactgcttcaaggcaagctggaccaacgcc
agcaaaaagcaacgtgaaaaactacttgaacttattcggcgcttggctgaagatgacaag
gatggtgtgatggcccacaaggtcctgaacctgctgtggaacctggcacacagtgatgat
gttcctgtagacatcatggaccaagcccttagtgctcacatcaagatactggactatagt
tgctcacaggacagagatacacagaagattcagtggatcgatcgcttcatagaggaacta
cgaaccaatgacaaatgggttattcctgccttgaaacagatcagggaaatttgtagcctg
tttggagaagctccgcagaaccttccaaagaaaattccaattaacatacacacgaactta
gtgagtcaaaccacaagaagtcctcatgtattttaccgccatgacctgatcaaccagctg
cagcataaccacgccctggtcaccctggtggcggagaatctctcagcctacatggagacc
atgaggcagttatccaaagaagaacaagcagaatttgatcctcagaccgtcagaccagga
agtcgctacagtcacgtccaggaagtacaggaacgactgaacttcctgaggtttctgttg
aaagatggccagctgtggctgtgtgcccctcaggctaagcagatctggaagtgtctggct
gagaatgcagtgtttctgtgtgaccgcgaggcctgcttcaaatggtactcaaaactgatg
ggggatgagccagacctagatccagacatcaataaggacttctttgagaacaatgtttta
cagttggacccgtctctgcttacggaaaatggcatgaaatgctttgagaggttcttcaag
gctgtcaactgcagggcggggaagctagtagcaaaacgcagggcctacatgatggatgac
ctggaactaatcggcttggactatctgtggagggttgtgattcaaggaagtgatgacatt
gctagccgagccatagacctattgaaagagatctacaccaacctcggaccaaaactacaa
gtcaaccaggttgagattcatgaagatttcattcagtcatgttttgaccgtctgaaggcg
tcctacgacacgctgtgtgtgctggacggagacaaagacagcattaattgtgcacggcag
gaggccatccgtatggtgcgagttctcacggtgctcaaggagtacataaacgagtgtgac
agtgactaccatgaggagaggacgatactgcccatgtccagggctttccgggggaagcac
atcacactgatcgtacgtttccctaaccaaggccgtcaggtggatgatttagacatctgg
tctcacaccaacgacaccatcggttctgttcggcgtggcatcctgaacaggataaaggct
aacgccgcgcacaccaagatcgagctgtttattggtggggaggtggtcgatccagctgat
gacaggaagcttatcggacagctcagtttgaaagacaagacgctgataacagccaaactg
acccaggtgagtgccaacatgccctcaagtccagacagctcatcggactcatccactggt
tctcctggtaatcatggaaaccattacagcgatggacccaaccctgaagtagagagctgt
ctccctggtgtgattatgtcactgcacccgcgctacatctccttcctgtggcagatagct
gacctgggctgcaacctcaacatgcctcagcttagagatggagctcgagttctcatgaaa
ctgatgcctccagataacaccacagtggagaatctgagagctgtgtgtctggatcatgct
aagctaggcgagaacagtctgagtccttcactggattcgcgttttttcggcccctcacca
tcacaagtgctctacctcattgaggttgtgtatgcgttgctgatgccagctagtgccact
ctgggggaggatgctagcgactttcagtacaacttcctaaagagtggtggtctgcccttg
gttctgagcatgctcaccaggaacaacttcctcccttcagcggacatggagacacgccga
ggggcttacctcaatgctctgaagatcgctaagcttcttctgactgcagttggctttgga
cacgtgaaagctgtggctgaggcctgtcagcccaacgctgagggaaatattcccgtctct
ccgataaaccaggcaactcacgaccaggcgctggttcttcagagtgccctgcagaacatt
cccaaccctgcctctgagtgcatgctgcgtaatgtagctattcgcctggcccagcagatt
tctgatgagaatttcttccaggcatcgaagtacatcccagacatttgtgtgatccgagca
gtgcagaaaattgtgtgggcgtcaggctgtggcacggtgcagctcgtcttcagttctaat
gaggaaatcagcaagatctacgagaagacaaatgcagccaaggagccagatggggaggat
gagcaggtgtgctgcgaggccttggaagtgatgacgctgtgtttcgctcttatgcccacg
gcgctggacacgctcagtaaggagaaggcctggcagaccttcatcatagacttgctacta
cactgccacagcaaatctgtgcgtcaaatggcccaggagcagtttttcttgatggcgact
aggtgctgtatgggacaccgaccccttttgttcttcatcaccctcctctttacagtgctc
gggagcacagccaaagagcgagctaaacatgccggggactattttactttgctgcgacac
ctgctgaactacgcctacaatagtaacatcaacctgcccaatgctgaggtgctgctcaac
aatgagattgactggctcaaacgaatacgggatgaggttaagaggacaggagaaactggt
gtggaggagaccatcctggagggccaccttggggtcaccaaagagcttctagccttccag
acaccagaaaaaaaatattacattggctgtgagaagggaggcgcaaaccttattagggag
ctgattgatgacttcatcttcccagcatctaatgtttacctgcagtacatgaagagtggg
gagttccctacagagcaggccatcccagtgtgcagcacgcctgcctccatcaacgctggc
tttgagctgctggtggcgctggctgtaggctgtgtccgcaacctcaagcagatggttgac
actctgactgacatgtactacctgggttgtgagacattaacagaatgggagtacttgcct
ccggtggggccacgacccaacaaaggctttgttgggttgaagaacgctggtgctacctgt
tatatgaactccgtcatccagcagctctacatgatccctcccatccgcaatggcatctta
gctattgaggggacgggcaccgacgtggatgatgatatgtcaggggatgagaagcaggag
aatgagagtaacgtagatccccgggatgaagttttctgctaccaccaccagtttgatgac
aagccgtccagtaagtcggaggacaggaaggagtacaacatcggtgtgctgcgtcaccta
caagtcatctttggccacctggctgcatccaggctgcagtactacgtcccaagaggattc
tggaaacagttcagactgtggggcgagccagtaaatctgagggaacagcatgatgctttg
gagtttttcaactccttggtggacagtttggacgaagctctcaaagctctgggtcaccct
cccatgctcagcaaggtgctgggagggtcttttgctgaccaaaagatctgtcaaggatgc
ccccacaggtatgagtgtgaggaatcattcacaacactcaacgtagacatcaggaaccac
caaaacctgttggactccatggagcagtatgttaaaggagatctgctggaaggagcaaac
gcctaccactgtgagaaatgtaacaagaaggtggacacagtgaagcgtcttctgatcaag
aaactaccacccgtccttgctatccagctgaaacgcttcgactacgactgggagagggag
tgtgccattaagtttaacgactacttcgagttccccagggagctggacatggagccgtac
acagtagcaggtgtggcgaagctggagggcgatgatgtgaacccagagaaccaggtgatc
cagcagaacgagctgtctgaggccacagcgccaggcagctccaagtatcgtctggtggga
gtgctggttcactcaggccaggccagcggcggacactactactcctacataatccagagg
aacggaggcgacggcgagaagaaccgctggtacaagtttgatgacggcgacgtgacggag
tgcaagatggatgatgaggaggagatgaagaaccagtgctttggaggagagtacatgggt
gaggtgtttgatcatatgatgaagaggatgtcgtatcggaggcagaagcgctggtggaat
gcttacatcctgttctatgagcgcatggactcactggacaaggacagcgaacttgtcaaa
tatatctcggagctgtccttatcctccaccaagccgcatcaagtcaagatgcccagcgtc
atcgaatgcagcgtccgcaagcagaacgtccagttcatgcacaaccggatgcaatacagc
ctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctatttaaatcct
cctccaggacaggaccatcttctgccagaggcagaggagatagctatgatcagcgctcag
ctggctgctcgcttcctcttcagcacaggttttcataccaagaaggttgtacggggtcct
gccagcgactggtatgatgccctctgcatcctgctgagacacagtaagaatgtacgctac
tggtttgcacacaacgttctgttcgcttaccctaaccgcttctctgagtacctcctggag
tgcccgagcgctgaggttcgtggagcgcttgccaagctcatagtcttcatcgcccacttc
tccctgcaagacgggccctgcccctcccccactgcctcacctggaccctcagctcagggc
tgtgataacctgagccttagtgaccacttgttgagagcggtactgaacttgctcagaaga
gaggtttctgaacatggccgacacttgcagcagtactttaacctctttgtcatgtatgcc
aacctgggccttgcagaaaagactcagctgctgaagctcaacgtccctgctacctttatg
ttggtggctctggacgagggtcccggccctcccattaaataccagtacgctgagctgggc
aagctttacactgtggtgtcacagctggtgcgctgctgtgacgtctcctcacgcatgcag
tcctccatcaacggtaaccctccccttcaaaacccytatggggacccgaatctgacggct
ccagtcatgcctgtgcagcagctggtggctgagatcctgtttgtaaggacgagctacgtg
aaaaagatcattgaggattgcagcaactctgaggagacggtgaagctgcttcgtttctgc
tgctgggagaaccctcagttctcctccacygttctcagtgagctgctctggcaggtggca
tattcctacacatacgagcttaggccttarctggacttgttgctacagatcctgctgatc
gaggactcgtggcaaacacacaggatccacaatgtgcttaaaggtattcctgatgacaga
gatgggctgtttgacaccatccagcgctccaagaaccactatcagaaacgggcctatcaa
tgcatcaagtgcatggtggccctctttagcaactgctctgtggcttaccagatcctgcag
agtaacggggacttgaagcgaaagtggacgtgggctgtggagtggttgggggatgagctg
gagaggaggccgtacacaggaaatccacagtacacctacaacaactggtccccccctgtg
cagagcaacgagacctccaacggatacttcctggagcgctctcacagcgctcgcatgacg
ctggccaaggcctgcgaactctgtcctgaagagctcaagtgtactcagggaagcccaggg
aaggagcccgatgaacaggaagcacctgatgatcaggattcctccccacctgaggacacc
tctctgtacccccattctcctggaaccacccagtttcagcagcagaataaccaccctcat
gggcagccatacactgggcctgctgcccagcacatgaacaacccccagcgtcccggtcct
gcttctgctccaactccaggcccgacccagacccagaccccgaccccaggccccagtacc
actcctggctcaggcccacgagcacaagaaaactgggaaggcactgaggaggttgcccct
gccccgagctcaaccccagcccccaccccgcctaaggaataa
DBGET
integrated database retrieval system
