Austrofundulus limnaeus (annual killifish): 106536884
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Entry
106536884 CDS
T06063
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
alim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106536884
03015 mRNA surveillance pathway
106536884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106536884
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106536884
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106536884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
106536884
NCBI-ProteinID:
XP_013889683
UniProt:
A0A2I4DBR6
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MSEDAWSTAVDVQETSQLDLNKRPSRLRAPPKMKEDINANGSRSEHGGHGEEVDLAEQSL
LNKMIRHSLVRNRNQVEVLQADPTSPLYSVRTFEELRLKPELLKGVYHLGFNRPSRIQEN
ALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNTANKWTQCLCIAPTYELALQIGQV
IEQMGKFLPDVKLAYAVRGSRMERGVKLQEHIVIGTPGTVLDWCTKYKLIDPKRISLFVL
DEADVMIATQGHRDQSIRIHRQLSKECQMLLFSATFEDSVWKFAERVVPDPNIIKLRREE
ETLDNIKQFYVLCRDKEEKFAALCDLYGSLTVAQAMIFCHTRWMANWLAASLTEEGHQVA
LLSGEMTVEQRAAVIERFRSGKEKVLVTTNVCSRGIDVEQVTLVVNFDLPTDLEGNADND
TYLHRIGRSGRFGKRGFAINMVENKHGMELIKQIEMHFNRKIHKLDPTNSEEISLLQS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagatgcctggtctacagcagtggatgttcaggagacatctcagttggacctt
aacaagagaccgagtcgactgcgagctccacccaagatgaaggaagacataaatgccaac
gggtccaggagcgaacatggcggtcacggagaggaggtggacctggccgaacagtccctg
ctgaataaaatgatccgtcactccctggtgaggaacaggaaccaggtggaggttctgcag
gccgacccgacctcacccctgtactccgtcaggacctttgaggagctcagactgaaacct
gagctgttgaaaggtgtgtaccacctgggcttcaacagaccctccaggatccaggagaac
gctctgcccatgatgctggctcagccacctcagaacctgattgcccagtcccagtctggt
actggtaaaaccgctgccttctctctggccatgctcagccatgtaaacacygccaataaa
tggactcagtgtctttgcatcgctccgacctacgagctggctctgcagatcggtcaggtc
atcgagcagatgggcaagttccttcctgatgtcaaactggcgtacgcagtgcgaggaagc
agaatggagcgaggtgtaaagctgcaggaacacatcgtcatcggcacgccgggcaccgtc
cttgactggtgcaccaagtacaaactcatcgaccccaagaggatttctctgtttgtgctg
gatgaagcagatgtgatgatcgccacgcagggccaccgggaccagagcattcggatccac
aggcagctcagcaaggagtgtcagatgctgcttttctctgcaacctttgaggactcggtg
tggaagtttgcagagcgagtggttcccgaccccaacatcatcaagctgagacgggaggag
gagacgctggacaacatcaaacagttctatgttctgtgtcgagataaggaggagaagttc
gcagctctctgcgatctgtacggcagcctgactgttgctcaggccatgatcttctgccat
actcggtggatggcgaactggctggctgcgagcttgacagaggagggccaccaggtggcg
ctgctcagtggagagatgacagtggagcagagagctgctgtgatcgaacgcttcaggagc
ggcaaggagaaggtgctggtcaccactaacgtgtgttccagaggaatcgatgtggagcag
gtgacacttgtcgtcaactttgacctccccacggacctggaggggaacgctgacaatgat
acgtacctgcatcggatcgggcgctcggggcgcttcggtaaacgaggttttgccatcaac
atggtggagaacaaacacggcatggagctcatcaagcagatagagatgcatttcaacagg
aagatccacaaactggaccctactaactctgaggagatcagtctgctgcagagctga
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