Austrofundulus limnaeus (annual killifish): 106536904
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Entry
106536904 CDS
T06063
Name
(RefSeq) collagen alpha-1(XXII) chain-like
KO
K16630
collagen type XXII alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
106536904
NCBI-ProteinID:
XP_013889700
UniProt:
A0A2I4DBT8
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MEYFSVKDILGTRDDDGQSSYVRLGTVPVVQHTEEVFSQGLPDEYAFVTTFKFRKTSRRE
DWYLWQIYDKYGIPQVSVRLDGENKAVEYNAVGLTKDAVRTVFKNPQVDSLFDRNWHKIA
LSVEAKQVSLYLDCKHIQTLPIEAREDIDIQGKTVIGKKLYDSVPIDFDLQRMMIYCDSK
HAELETCCDLPTGPCSKKVVTEAPPVEIPTPTPTAAEQKRGPETNCSCPEGKKGDVGLPG
AAGSKGEKGDIGPKGAIGPAGIKGEKGETGNINSVKADRGEKGDKGSIGLTGAPGQKGEK
GVGGIPGIDGLPGDKGDKGEAGLPGVRGLQGPTGLKGIQGDAGSPGTPGPKGVNGDYGEK
GEQGIPGTNGLPGVDGLPGKQGLPGKDGLRGLVGAPGPSGVKGNKGERGLPGLPGDAVQQ
EGMRGERGEPGPPGPPGADGSPGPAGPPGPQGLPGEHGEPGQRGRKGENGLPGVDGLPGP
PGLPGPAGPPGQTGQTGQPGLPGEMGRQGKAGEPGKSGVPGKDGLDGPPGNDGAMGPRGE
RGADGFPGKAGPKGDVGPPGPRGPPGERGESGHPGQSGSDGMRGDRGVPGEKGMDGPVGP
KGEKGDKGETGPKGPPGIPGNVAEIIPEPGEPGKPGEKGEKGEQGNPGNTGLKGLPGERG
LEGPPGPAGPKGDTGLNGETGRVGDPGPPGTPGPQGAQGLPGSVGIPGIIGPPGPAGQKG
DKGDTGKPGQSGPQGQPGEPGFTGPPGPPGKGKDGQTGEPGPPGIQGPPGAKGQPGPRGQ
IGVPGDRGPPGEGKEGPPGPSGKNGEPGAVGLRGPPGLPGPQGPAGHNGLAGRPGEKGSP
GEPGKAADLSDMNLKDLCSDCPAGPPGPPGLPGLPGDKGQQGLPGKNGEDGYQGPPGPSG
PTGTPGADGAKGVKGDQGPPGSPGEKGDLGHQGPPGRPGPPGLMGAAGNDGQPGPVGPSG
PAGEKGKEGPKGIQGPPGLPGLIGQPGKMGKDGRPGEAGEPGKQGEPGPSGNPGLRGLPG
FKGHRGEPGTPGTKGEDGKPGLPGRDGKPGNEGVKGPPGPEGLVGARGEPGKPGEPGPSG
KSGLPGTPGLRGDKGEPGSIGLPGFSGPKGPAGPPGPTGPEGKQGTPGRAGERGFKGEKG
DHGIKGDKGQSGEPGMPGNPGPPGRKGHTGMMGMSGPPGEIGPP
NT seq
3551 nt
NT seq
+upstream
nt +downstream
nt
atggagtacttcagtgtgaaagacattctgggaaccagagatgacgacggtcagagttcc
tacgttcgtctcggcacagttccagttgttcagcacacagaggaagtgttttctcaaggt
ctgcctgatgaatatgcctttgtgaccacatttaaattcagaaaaacctcaagacgtgaa
gattggtatctttggcagatttatgacaaatatggaatcccacaggtgtccgttcgcttg
gacggtgaaaacaaggcagtggagtacaacgctgttgggctgacaaaagatgctgtcaga
actgtctttaaaaacccccaagttgacagcttgttcgaccgcaactggcacaagattgct
cttagtgtggaggccaagcaagtctctctgtacttggactgtaaacacatccagacactg
cccattgaagctcgagaggacattgatattcagggaaagacggtgatcggaaagaaactt
tatgacagcgtgccgattgattttgacctccaaaggatgatgatttactgtgattcaaag
catgcagagctggagacctgctgtgaccttccaactggaccttgctctaagaaagttgtg
acagaagctcctccagtggaaattcccactccgacgccgactgctgcagagcagaaaaga
ggccctgaaacaaattgttcctgcccggaggggaaaaagggagacgtcggtttacctggt
gcagcaggttcaaagggtgaaaagggtgacattggccctaaaggtgccatcggaccagca
ggcatcaaaggggaaaaaggagaaactggcaatataaactctgtcaaagctgacagaggt
gagaagggtgataaaggcagtatagggttgacaggtgctcctggacagaaaggagagaag
ggtgttggtggtattccaggcattgatggcttacctggtgacaaaggagacaaaggtgaa
gcaggcctgccaggtgtccgagggttacaaggtccaactggattaaagggaattcagggg
gacgcaggaagtcctggtacacctggaccaaagggtgttaatggagattacggtgaaaag
ggtgaacaaggaattccaggaaccaatggtttgccaggtgtggatggattacctggaaaa
cagggacttcctggaaaagatggtttgagaggactggttggagctcctgggccgagtggt
gtaaaaggcaacaagggagagagaggccttcctggattacctggtgatgcagtacaacaa
gaaggcatgcggggtgagaggggagaacctggacctccagggcctccaggagcagacggt
tccccagggcccgctggtcctcctggtccacaaggcctacctggagaacatggagaaccg
ggccaaaggggaaggaaaggtgaaaatggactgcctggtgttgatggcttacctggacct
ccgggtctaccaggtccagcaggtccaccagggcaaacaggacaaactggacaacctggc
ctgcctggtgaaatgggaaggcaggggaaagcaggagaaccaggaaagtctggtgttcct
ggaaaagatggcttagatggacctcctggaaatgacggtgccatggggcccaggggggaa
cgtggagcagatggttttcctggaaaagcaggacccaagggtgacgtagggcctcctgga
ccaagaggtcctccaggagaaagaggagagtctggtcaccctgggcagtctggctctgac
ggtatgagaggagatcgaggtgttccgggggaaaaaggaatggatggaccagttggacca
aaaggtgaaaagggtgataagggtgaaactggacctaagggaccacctgggattccagga
aatgttgcagagatcatcccagagcctggagaaccagggaaacctggagagaagggagaa
aagggagaacaaggaaatccaggaaacacgggtctaaaagggttacccggtgaacgaggt
ttggaaggacctccaggaccagctggtccaaagggagacacaggtcttaacggggagaca
ggacgggttggagatcccggtccaccaggaactccaggtcctcagggagcccaaggttta
ccaggaagtgtgggtataccagggatcattgggcctcctggtccagctggacagaaagga
gacaagggtgacacagggaaaccaggacagtcaggcccacaaggtcaaccaggagagcct
ggtttcaccggccctcctggaccaccagggaaaggaaaagatggccaaactggagaacca
ggaccaccggggattcaaggcccacctggtgcaaagggccagccgggaccacgtgggcag
attggggttccaggagatcggggccctccaggagaaggaaaagaaggaccaccggggccc
tcaggaaaaaacggggagccaggagctgtgggtttgagaggcccaccaggtctgcctggt
cctcaaggcccagcagggcacaatggtttagcaggaaggccaggagaaaagggatcacct
ggagaacctggaaaggcagcagatctttctgacatgaatctgaaggacctctgctcagac
tgccctgcaggtccacctggaccacctgggctcccaggactccctggagataaaggacaa
cagggacttcctggaaaaaatggagaagatggatatcagggcccacctggaccatcggga
ccaacagggacccctggagctgatggtgcaaagggagtaaaaggggatcaaggacctcct
ggaagccctggagaaaaaggagacctgggtcatcaaggaccccctggtcgcccgggtcct
cctggattgatgggtgcagctggtaatgatggacaacctggcccagttggtccctcaggg
cctgctggagaaaagggtaaagagggtcctaaaggaatccaaggaccaccaggtcttcct
ggcttgataggtcaaccagggaaaatgggcaaagatggtcgaccaggagaagcaggagaa
cctggcaagcaaggtgaacctggaccttcaggaaaccctggactcaggggcctcccaggt
tttaaagggcacagaggagaacctggaactccaggaaccaagggagaagatggaaaacct
ggcctacctggacgtgatggtaaacctggaaatgagggtgttaaaggacctccaggccca
gaaggacttgttggagcaagaggagaacctggcaaaccaggtgaaccaggaccatctgga
aaatcaggtctcccaggaaccccaggtctcagaggggacaaaggagagcctggcagcata
ggattaccaggtttcagtgggccgaagggcccagcgggtccacctggtccgactggccct
gaggggaaacagggaacaccaggccgagcaggagaacgtggtttcaagggagagaagggt
gaccacggtattaaaggagataaaggacaatctggagagcctggtatgcctggaaaccct
ggtcctccaggcaggaagggccacactgggatgatgggcatgtcaggaccgccaggtgaa
ataggaccccc
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