Austrofundulus limnaeus (annual killifish): 106537008
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Entry
106537008 CDS
T06063
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106537008
Membrane trafficking [BR:
alim04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
106537008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
PPR_2
PPR_3
uDENN
PPR_long
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
106537008
NCBI-ProteinID:
XP_013889824
UniProt:
A0A2I4DC49
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MGVSVESWPLNTKYQLPVFSTFVLTSASGDKVYGAAIQFYESFCRDLLTERQSIQLGLLS
VVDRRPISSRSLHVKKSICVLSHWPFFTVFQKFLTFVYRYSISGPHILPLEKHVSGFMHN
VPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPENTCTLLLAVLTE
HKLLLHSLRPDVLTSVSEALVSMTFPLRWLCPYIPLCPLQMADVLLAPMPFIVGVHSSYF
DLHDPPAEVVCVDLDTNTVFQSEDKKASWRSLPRKHGKTLFNTLTNLHRTLEKICSSGQE
EATLEFLLTDYDQVYRRQKQLELEIQEAFLRFMSCLLRGYRTFLLPITQAPSDRTTDCSS
LFNLQGFLKSRDRTQQKFYIQMMKTQMFTQFIEECSFVSDRHACLEFFDECVQKVGVEKP
EEVRLIDLDETHSGEHTVFIMPPEEPQEADGSECPALYSYETFPTLKAELFDRPQDQLRV
PAKGSAPDSPAPRRTKQEIKLAQQRAQKYFTVPDMWSKCLLGHCYGLWFIYLPTFVRAEP
SKVRALHTAYDVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPN
TITYGYYNKAVLESKWPSTNQGGRLRWVKLRNVLLAVAQFRRPIRRRQKSDSLGSRGEAG
VEPDQKLLPHLALIRQSSWSGLSESSSHESLSGPLVKSSSLSSMKTHSDKTQSCRRTVES
KINGCGDAVSQKPPLGRRDVSVPPAAPPGGVVVRRSEICLSTFYSECAESADSELDCSCR
PEDRDGRSDRPRGSAHRNKVIDENSNNVSSPSRGGLTGKLQQLLTPTRHRTSSRRAASVD
HRRSGGGGGGGGRRVSEQRQARKSHVAETLLKAKERLVNATSESSLSVGSDVDLSDTPTQ
AFPVRRSWDCSHDGAGMEVLMSSCSLCRSCNSLVYDEEIMAGWSSDDSNLNSSCPFCGTS
FVPFLNAEICDLGPVSSAERRHLNLEDEVESAVRPPSGLEPGTRPHCNGLSDDSSSETSS
YSETSRTTTVSSAGGTPQVAVPYLSPLVLRKELESLLQNEGEAVLAQPQFLDNHSIIFWN
LVWFFQRLGLPTNLLQLVRSSPLVSHFTQSENSSVRVRLLWDTLSPDTDQWPPLYVLWRI
HSGVPMRSYSWRRHNHPFTLSFLEEVLRWVGMNEVHKAVTLLLDTLAKQPGSPRTQRSLY
REFLFLTLAAMGKDHVAAFDKKFKAAHSRLISSLGREELHRRRAEPPSSKAIDCRRSFHP
PLEC
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcagcgtggagagctggcccctcaacaccaagtaccagctgcccgtcttctcc
accttcgtcctgacgtccgcctccggggacaaggtttacggagctgccatccagttctac
gagtccttctgcagggacctcctgacggagcggcagagcatccagctgggtctgctcagc
gtggtggacaggcgtcccatcagcagccgaagcctccacgtcaagaagagcatctgtgtc
ctgtcccactggcccttcttcaccgtcttccagaagttcctgaccttcgtctacagatac
tccatctctggacctcacatcctgccgctcgagaaacacgtgtccggcttcatgcacaac
gtcccgtttccgtcccctcagcgtcctcggatcctggtccagctctcaccgtacgacaac
ctgctgctctgtcagcccgtctcctcccccctccctctcagtggagcgagcttcctgaag
ctgctgcagaacctcggtccagagaacacgtgcacgctcctgctggccgtcctcacagaa
cacaaactgctgctgcactcgctcagacctgacgtcctgacctctgtcagcgaggccctc
gtctctatgaccttccccctgcgctggctctgcccctacatccccctgtgcccgctgcag
atggctgacgtcctgctggcaccaatgccgttcatcgtgggcgttcactccagctacttt
gacctccatgaccccccagctgaggtggtgtgtgtggacctggacaccaacaccgtcttc
cagtcagaggataaaaaggcgtcatggcgatcgttacccagaaagcacggcaaaactctg
ttcaacactctgaccaacctccacagaaccctggagaagatttgcagttctggccaggag
gaggcgacgctggagttcctgctcacagactacgatcaggtctacaggcggcagaagcaa
ctggagctggagatccaggaggccttcctgcgcttcatgagctgcctgctgagaggatac
agaaccttcctgctgcccatcacacaggcgccgtcggaccggaccaccgactgcagctcc
ctgttcaacctgcagggtttcctgaagtctcgggaccggacgcagcagaagttttacatc
cagatgatgaagacccagatgttcactcagttcatcgaggagtgctccttcgtcagtgac
cgacacgcttgcctcgagttcttcgacgagtgcgtccaaaaggtgggtgtggagaaaccc
gaggaggtccggttgattgatctggatgagactcacagtggagagcacaccgtctttatc
atgcctcctgaggagccgcaggaagctgacggctctgagtgccccgccctctacagttat
gagaccttcccgaccctaaaagcagaactgtttgaccgaccgcaggaccagctccgagtc
ccggccaaaggcagcgcccccgatagccccgccccccgacgcaccaaacaggagatcaag
ttggcccagcagcgggctcagaagtactttacggttccggacatgtggtccaagtgtttg
ctgggtcactgttacggtctgtggttcatctacctgcccaccttcgtccgggccgagccc
tccaaggtccgggccctgcacacggcctacgatgtcctgaagcacatggagacccgcaaa
gtggttctgcccgacgaggtgtgttatcggatcctgatgcagctgtgtggtcagtacggt
cagccggtcctcgcggtccgggtcctcctggagatgaagaaggctgggatcacccccaac
actatcacctacggatactacaacaaggccgtcctggagagtaagtggccgtcaaccaat
cagggcggccgtctacgttgggtcaagctgaggaacgtcctattggctgtggctcagttc
agacgaccaatcagacggcggcagaagagcgactctctgggctcccggggagaggcgggg
gtggaaccggaccagaagctcctcccacacttggctctgattcgtcagtccagttggagc
ggtctgagtgagagctccagtcacgagtctctgagcggtcctctggtgaagagcagcagc
ctgagcagcatgaagacgcacagtgacaagacccagtcctgtaggaggactgtggagtcc
aagatcaacggttgtggggacgccgtctctcagaagcctccactgggacgacgagacgtc
tccgtccctcctgctgcgccccctggtggtgtggtggtccgccgcagtgagatctgcctg
tccaccttctactcggagtgtgccgagtccgcagactcagagctggactgcagctgccgg
ccggaggacagagacggcaggtctgacaggccacgaggctccgcccacaggaacaaggtc
atagacgagaactccaacaacgtgtcgtctccgagccgaggaggtctgacaggaaagctg
cagcagctcctcacgccaacccgacatcgcacatcgtcacgcagagccgccagcgtggac
caccggcgctcaggaggaggaggaggaggaggaggacgaagagtatcagagcagaggcag
gccaggaaatcacacgtggctgaaactctgctgaaagctaaggagcgtctggtgaacgcc
acgtcagagagctctctatccgtaggaagtgacgtggacctgtcggacacgcccacacag
gcgttccctgtgcgcaggtcgtgggactgcagccatgacggggcagggatggaggttctg
atgtccagctgctcactgtgccgcagctgtaactctctggtttacgacgaggagatcatg
gcgggctggagctccgacgactccaacctgaactcgtcctgcccgttctgcggcacctcc
ttcgtgccgttcctgaacgctgagatctgtgacctggggcccgtcagcagtgcggagcgc
cgtcacctgaacctggaggacgaggtggagagcgccgtcaggccccccagcggtctggag
cccggcacccggccccactgtaacggactgagtgacgactccagctccgagaccagcagc
tactctgagaccagcagaaccaccacggtgtcgtcggcgggcgggactcctcaggtggcg
gtgccctacctgagccctctggttctgaggaaggagctggagagtctgctgcagaatgaa
ggcgaggcggttctggcccagcctcagttcctggacaaccactccatcatcttctggaac
ctggtctggttcttccagaggctcggcctgcccaccaacctgctgcagctggtccggagc
tcgccgctggtcagccacttcacacagtctgagaactcctcggtacgagtccggctcctc
tgggacaccctgagccccgacacagaccagtggccccccctctacgtcctgtggaggatc
cacagtggcgtccccatgaggagctacagctggaggagacacaaccaccccttcaccctg
tccttcctggaggaggtgctgcgctgggtgggcatgaacgaggtccacaaggccgtcacg
ctcctcctggacacgctggccaagcagcccggctcgccacggacccagaggagtctgtac
agagagttcctgttcctcactctggcagcgatgggtaaagaccacgtggcggcctttgat
aagaagttcaaagctgcccactctcgtctcatcagctctctgggtcgggaggagctccac
aggaggcgggccgagccccccagctctaaagccatcgactgcaggcgcagcttccacccc
cctctggagtgctga
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