Austrofundulus limnaeus (annual killifish): 106537252
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Entry
106537252 CDS
T06063
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04150
mTOR signaling pathway
alim04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106537252
04150 mTOR signaling pathway
106537252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106537252
Membrane trafficking [BR:
alim04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
106537252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
106537252
NCBI-ProteinID:
XP_013890092
UniProt:
A0A2I4DCZ1
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MGVSLRSLLLLWTFCCLVRGPAGEPLLLYANRRDLRIVDVEHEKTNGTVVVEGLEDAAAV
DYVYSQGLVYWSDVSEEAIKRTFFNQSGHSVVQTVLPGLTSPDGLACDWLGRKLYWTDSE
ANRIEVAELDGSLRKVLFWQELDQPRAIALDPERGFMYWTDWGEVPKIERAGMDGTNRSI
IIDKDINWPNGLTLDYSELQLYWADAKLNFIHRADLDGSARKVVIKGDLPHPFALTLFQN
TLFWTDWTTHSIHSCSKLTGQNQRLVHSNIFSPMDIHVFSPQRQPVSASTWCSVNNGGCS
HLCLLSPSRPFYRCACPTGVQLLEDSKTCRDGATQMLLLARRTDLRRISLDTPDFTDLIL
QVEDIRHAIAIDYDPVEGYVYWTDDDVKAIRRALLDGSHAQFVVTSQVSHPDGIAVDWIA
RNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPTAGYMYWTDWGEVPKIERA
NMDGTERLVMVNTSLGWPNGLALDYNEQKIYWGDAKTDRIEVMNMDGSARRVLVKDRIPH
IFGFTLLDDFIYWTDWQSRSIERVHKHTAERETIIDQLPDLMGLKATKVHQAFGTNPCAD
SNGGCSHLCLFTPHGVQCDCPIGLELIADMRTCIIPEAFLLFSRHTDIRRISLETNNNNV
AIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVQFGLDYPEGMAVDW
LGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKID
RAAMDGTGRVTLVADVGRANGLTIDYSERRLYWTDLDTTLIESSNMLGQDREVIADDLPH
PFGLTQFQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVFHSSRQGGWNTCA
STNGHCSHLCLAVPIRGFVCGCPAHFSLNSDNKTCNAPTSFLLFSQKNSINRMVIDEQQS
PDIILPIHNLKNVRAIDYDPLDKQLYWIDSKQNVIRRTQEDGNQSTTVVSSFVVAPGPGL
QLFDLSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFT
NLQERSPKIERAALDGTEREVLFFSGLGKPVALAIDDEVGKLFWVDSDLRRIESSDLSGA
NRVVIADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKTTREGRTKVQARVAYLSDIHAV
QELDMKDYSKHPCTNDNGGCSHICVVKGDGTTRCSCPIHLVLLPDELTCGEPPTCSPKQF
TCRSGEVDCIPNTWRCDGYVECDDSSDEEDCPVCSESEFQCDSRQCIDXSLRCNGEVNCQ
DKSDENECEVRCPADQFSCSNGQCIGKHKKCDHNMDCSDNSDEIGCYPTEEPQPSSNNTI
SSIVGVVMALFVVGAIYFVCQRVLCPQMKDDGETVTNDFVVHGPSVPLGYVPHPSSLSSS
LPGMSRGKSVIGSLSIMAGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATV
RSQYTLEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLRPAAA
SKGYASDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDS
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgggagtctcgctgcggagcctgttgttgttgtggactttttgttgtctcgtccgagga
cctgcaggcgagcccctcctcctctatgcgaacaggcgggacctgcggatcgtggacgtg
gaacatgagaagaccaacgggacggtggtggtggagggtctggaggacgccgcggccgtg
gactacgtgtactcccagggtctggtgtactggagcgacgtgagcgaggaggccatcaaa
cggaccttctttaaccagtctggacacagcgtggtccagaccgtgctgccgggtctgacc
tccccggacggactggcctgtgattggttggggaggaagctgtactggacggactctgag
gccaatcggatcgaggtggctgagctggacgggtctttgaggaaggttctgttctggcag
gagctggaccagcccagagccatcgccctggatccagaacgagggttcatgtactggacg
gactggggcgaggtgccaaagatcgagcgggccgggatggacgggaccaaccggtccatc
atcatcgataaggacatcaactggcccaacggactgaccctggactactctgagctgcag
ctgtactgggccgacgccaagctcaacttcatccaccgggccgacctggacggctccgca
aggaaggtggtgatcaaaggggacctgcctcacccgttcgccctgaccctgttccagaac
acgctattctggaccgactggaccactcactccatccactcctgcagcaagctgacgggt
cagaaccagcgcctcgtccactccaacatcttctctcccatggacatccatgttttcagt
ccccagagacagcccgtctcagccagcacctggtgttctgtcaacaatggaggatgttct
cacctgtgcctgctgtctccaagcagacccttctacaggtgtgcctgtcccaccggagtc
cagctgctggaggacagcaagacctgcagagacggagccacccagatgctgctgctggcg
cggcggacagacctgcggcggatctctctggacacgccggacttcacggacctcatcctg
caggtggaggacatccgtcacgccatcgccatagactacgacccggtggagggctacgtg
tactggactgacgacgacgtgaaggccatccgccgcgccctgctggacggaagccacgcc
cagtttgtagtcacgtcccaggtcagccaccccgayggcatcgctgtggactggatcgcc
cggaacctctactggaccgacactggcacggaccgcatcgaggtgacccgcctgaacggc
accatgaggaagatcctgatctctgaggacctggacgagcccagggccatcgttctggac
cccacggccgggtacatgtactggaccgactggggcgaggtgccgaagatcgagcgggcc
aacatggacgggacggagcggctggtgatggtgaacacgtctctgggctggcccaacggg
ctggccctcgactacaacgaacagaagatctactggggagacgccaagacggaccggatc
gaggtgatgaacatggatgggtcggcccgacgggtcctggtgaaggacaggattcctcac
atcttcggcttcaccctgctggacgacttcatctactggacggactggcagagccgcagc
atcgagagagtccacaaacacaccgccgagagggagaccatcatagaccagctgccagac
ctcatgggcctcaaggccaccaaagtccaccaagctttcggtactaacccgtgtgcggac
tccaacggcggctgcagccacctgtgcctgttcacgcctcacggcgtgcagtgcgactgc
cccatcggtctggaactgatcgctgacatgcggacctgcatcatccccgaggccttcctg
ctcttttctcgccacacggacattcgcaggatctccctggagaccaacaacaacaacgtg
gccatcccgctgacaggagtcaaggaggcctctgcgctggacttcgatgtcaccgacaac
cggatctactggactgacatcacactgaagaccatcagccgggccttcatgaacggcagt
gctctggagcatgtggtccagttcggacttgactatccagaggggatggcggtggactgg
ctggggaagaacctgtactgggctgacactgggaccaaccgcattgaagtggccaaactg
gatggacagcaccggcaggttctggtctggaaagatctggacagcccacgagctctggct
cttgatcctgctgaggggttcatgtactggactgagtggggtgggaaaccaaagatagac
cgggccgccatggacgggacgggacgggtcacgttggtagctgatgtgggccgggccaac
ggactcaccatcgactactctgagcgacgtctctactggaccgacctggacacaaccctg
atcgagtcgtccaacatgctcggtcaggaccgggaggtgatagctgatgacctccctcat
ccgtttggtctgacccagttccaggactacatctactggacggactggagccagcgcagc
atcgagcgagccaacaagaccagtggtcagaaccgcaccctgatccagggccacctggac
tacgtcatggacatcctggtgttccactcgtccagacaggggggctggaacacctgtgcc
tccactaatggacactgctcccacctgtgcctcgccgtccccatcagaggctttgtctgc
ggatgccccgcccacttctctctaaactccgacaacaagacgtgcaacgctcccacatcg
ttcctgctcttcagccagaagaactccatcaaccggatggtgatcgacgagcagcagagc
cccgacatcatcctgcccatccacaacctgaagaacgtccgcgccattgactacgacccg
ctcgacaagcagctctactggatcgactccaagcagaacgtcatccgccgtacgcaggag
gacgggaaccagagtacgacggtggtgtcgagtttcgtggtggcgccgggtccgggcctg
cagctgtttgacctgagcatcgacatctacagccgcttcatctactggaccagcgaggtg
accaacgtcatcaacgtgacccgaacggacggcagcagggtgggcgtggtgctgcggggc
gagcacgacaagcccagagccatcgtggtcaacccggagcgtgggtacatgtacttcacc
aacctgcaggaacgctcaccaaagatcgagcgagcggcgctggatggcactgagcgggag
gttctgttcttcagtgggctgggaaaaccggtggctctcgccatcgacgacgaggtcggg
aagctgttctgggtcgattcggatctgcgacgcatcgagagcagcgacctgtctggcgcc
aatcgggtggtgatcgcggactcaaacatcctgcagcctgtgggactgacggtgttcggg
aaccacctgtactggatcgacaagcagcagcagatgattgaacgcatcgacaagacgacg
agggagggccgcaccaaggtgcaggcacgagtggcctacctgagcgacatccacgctgtg
caggagctggacatgaaggactacagtaaacacccctgtaccaacgataacggtggctgc
tcccacatctgcgtggttaaaggagacgggacgacgcgctgctcctgtcccatccacctg
gtgctgctgccagatgagctcacctgtggagaaccacccacctgttcgcccaagcagttc
acctgcaggtccggggaggtggactgcatccccaacacctggaggtgtgacggctacgtg
gagtgtgacgacagcagcgacgaggaggactgccccgtctgctccgagtccgagttccag
tgtgacagccggcagtgcatcgacatragcctgcgctgcaacggagaggtcaactgtcag
gacaagtccgacgagaatgagtgtgaagtgcggtgtccagcggatcagttcagctgttct
aacggtcagtgcatcggtaaacacaagaagtgtgaccacaacatggactgcagcgacaac
tcagacgagatcggctgctatccaacagaggagccgcagccttcatccaacaacaccatc
agctccatcgtgggcgtggtcatggcgctgttcgtggtgggtgccatctacttcgtgtgt
cagcgtgtcctctgtcctcagatgaaggacgacggggagacggtcaccaacgacttcgtg
gtccacgggccgtcggtgccgctgggatacgtgcctcacccgagctcgttgtccagctcg
ctgccaggtatgtccagagggaagtctgtgattggctctctgagcatcatggcgggcggc
agcagcggcccgccatacgaccgcgctcatgtgaccggcgcctcgtccagcagctcctcc
agcaccaagggaacatatttccccccgatcctgaacccgcccccgtctccggccacggtc
cggtcccagtacacgctggagttcggctactcctccaacagtccgtccacccaccgctcc
tacagctaccggccgtacacctaccgtcactttgccccgcccaccacgccctgcagcacc
gacgtgtgcgacagcgactacacgccgggccgccgggcgccgctcagacctgcggcggcc
tccaaaggctacgccagcgacctgaactacgactcggagccgttcccgccgccgcccacg
ccgcgcagccagtacctgtctgctgaggagaactgtgagagctgcccgccgtcaccctac
accgagcgcagctactcccaccacctgtacccaccacccccctcgccctgcacggactcc
tcctga
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