KEGG   Austrofundulus limnaeus (annual killifish): 106537297
Entry
106537297         CDS       T06063                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:alim03009]
    106537297 (wdr18)
Ribosome biogenesis [BR:alim03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    106537297 (wdr18)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR18_C NBCH_WD40 Beta-prop_TEP1_C Beta-prop_TEP1_2nd WDR55 WD40_Gbeta WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Aladin ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_WDR75_2nd Ge1_WD40 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_ACSF4 WDR54 TAF1C_beta-prop Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 KNTC1_N Beta-prop_IP5PC_F WDR93
Other DBs
NCBI-GeneID: 106537297
NCBI-ProteinID: XP_013890137
UniProt: A0A2I4DD27
LinkDB
Position
Unknown
AA seq 430 aa
MAAPLEVIVSSDSASQLWNCTVFDLHSGSSLLSYRGGNSAARSLALLRGDFLLSAQLAKN
FINVWEIQRKDQLQQKIVCPGVVTCLTVSPDGAFLAVGVAEAIYLWEVCTGKLLVVLSRH
YQDVTCLKFTDDGSHLVSAGKDNLALVWSVCSVVQLDLGHAPEPHHVLSRHSLPITDLHC
GRMGAQARIATASLDQTVKVWELSSGEMLLSVLFDVEIMSVTFDPCEYFLFCGGSDGNIF
QVSLSSQFLSREKSFQSASEGTQVFKGHRNIVTCLSVSMDGTLLLSGSHDETVRLWDVQS
RQSVRCLAHKGPVTNAVIMPVSANMFLPDSRPAVPLPRFSRHLHASERNDEESGMVCLRP
ALYTQEEDESYLQKADRLYSLINTVTDNSGFGDGENTKDLIAELEEEVQTLKKVNKDLFE
FSSQMLKKPT
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggcggctcctctggaggtgatcgtcagcagcgactcggcctcgcagctctggaactgc
acggtgttcgacctccacagcggctccagcctcctgtcgtaccgcggcgggaactcggcg
gcccggagcctcgcgctgctccgcggggacttcctgctgtccgcgcagctggccaagaac
ttcattaacgtgtgggagatccagaggaaggatcagttgcagcagaagattgtgtgtcca
ggtgtggtcacctgtctgactgtgtcacctgacggagcctttcttgctgttggagtggct
gaggccatttacctgtgggaggtatgcacaggtaagctgttggtcgtgctcagtcgacac
tatcaggacgtgacgtgtctgaagttcacagacgacggcagccatttggtttctgcaggg
aaagataacctggccctggtgtggagcgtgtgcagtgtggtccagctggatttaggccac
gcccccgaacctcaccatgtcctgtctcgtcactcccttcccatcacygacctgcactgt
ggtcgaatgggagctcaggccagaattgcaactgcttcattggaccaaactgtcaaggtg
tgggagctgtcatcaggtgaaatgctcttgtctgtcctctttgatgtggagatcatgtca
gtgacctttgacccctgcgagtacttcctgttctgtggaggaagtgatggcaacatcttc
caggtgtctctgtccagtcagtttctcagtcgggaaaaatccttccagtctgccagtgaa
ggcacccaggtgtttaaaggacacaggaacatagtaacgtgcctgtctgtgtccatggat
gggactctcctcttgtctggatcacacgatgagacagttcgtctctgggatgttcagagc
agacagagtgttcgctgcctcgcacacaaaggtcccgtgacaaacgccgtcatcatgcct
gtttcagctaacatgttcctgcctgacagtcgtcctgctgttcctctgccgcgcttcagc
cgacaccttcatgcctcagagaggaacgatgaagagtcagggatggtgtgtctccgcccc
gcactctacacacaggaggaggatgagtcgtacttgcagaaagccgacaggttgtactca
ctgatcaacaccgtgactgacaattctgggtttggtgatggtgaaaacacaaaggatctc
atcgcagagctggaagaagaagttcagacactgaagaaagttaacaaagatctgtttgag
ttttccagtcagatgcttaaaaagcccacatag

DBGET integrated database retrieval system