KEGG   Acinetobacter lanii: G8D99_05955
Entry
G8D99_05955       CDS       T06989                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
alj  Acinetobacter lanii
Pathway
alj02024  Quorum sensing
alj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:alj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G8D99_05955 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    G8D99_05955 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alj03019]
    G8D99_05955 (hfq)
   03036 Chromosome and associated proteins [BR:alj03036]
    G8D99_05955 (hfq)
Messenger RNA biogenesis [BR:alj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     G8D99_05955 (hfq)
Chromosome and associated proteins [BR:alj03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    G8D99_05955 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QIO08607
UniProt: A0A6G8S378
LinkDB
Position
1287065..1287589
AA seq 174 aa
MEYKMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYK
HAISTVVPARNPRPAGAPAGAPAAGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGSQGGFG
GQQGGFGGQQGGFGGQGFGGQGGFGAQGGFGAPSTPSFDGEPKFDDAQEDENNR
NT seq 525 nt   +upstreamnt  +downstreamnt
ttggagtataaaatgtctaaaggtcaaactttacaagatccgttcttaaattctctccgt
aaagaacgtattcctgtttctatctttcttgtaaacggtatcaaactacaaggtcatatc
gagtcttttgaccaatacgttgttttattaaaaaatacagtaagccaaatggtttacaaa
catgcgatttctaccgttgttcctgcacgtaatccacgccctgctggtgcacctgctggc
gcgcctgctgctggtcaaggtggcttcggtggtcaaggtggcttcggtggtcaaggtggc
ttcggtggtcaaggtggcttcggtggtcaaggtggcttcggtagtcaaggcggcttcggt
ggtcaacaaggtggttttggcggtcaacaaggtggttttggtggtcaaggttttggcggt
caaggtggcttcggtgctcaaggtggtttcggtgctccgtctacacctagctttgatggc
gaaccaaaatttgatgacgctcaagaagacgaaaacaatcgttaa

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