Acinetobacter lanii: G8D99_14155
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Entry
G8D99_14155 CDS
T06989
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
alj
Acinetobacter lanii
Pathway
alj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G8D99_14155 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alj03021
]
G8D99_14155 (rpoC)
03400 DNA repair and recombination proteins [BR:
alj03400
]
G8D99_14155 (rpoC)
Enzymes [BR:
alj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G8D99_14155 (rpoC)
Transcription machinery [BR:
alj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G8D99_14155 (rpoC)
DNA repair and recombination proteins [BR:
alj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G8D99_14155 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QIO10038
UniProt:
A0A6G8S7K4
LinkDB
All DBs
Position
complement(3100929..3105122)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPMEKYQLLNDEEYFTALEEHGDE
FSAKMGAEAIQDLLKDIDLEAEIARLREEIPQTTSETKLKKASKRLKLMEAFNDSNNKPE
WMVLTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPTLIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAINAKGEGMVFADTDEVNR
ALATGQVDLHARVKARVHQTVIDDNGNREQQTIIVDTTPGRCLLWEVVPEGMDFQQINVE
MTKKNISKIINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPAKYAIIE
KAEVEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTTVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTLDGLVMTPFIQGGDVIENL
GARVLGRVLAEDAKKPGSDEVVLPRNTLIDEKLANFLEDSGVDEVKVRSVVNCASTFGVC
AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNG
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDIGRERERYKLPYGASILLKDGETIEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTVDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEISGVVSFGKETKGKNRLVITPDDGSEIYEELIPKWRTINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
DITDGGDTSFIKGEQIDYIRVVQENQAVAAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDELRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHELVND
FSEVDQAFSQALNEDQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttgctcgatatcatgcgcaaaaagacggattcagatggtcatgcaccagtt
gaatttgatcgtatccgtattggtcttgcgtcaccagaaatgatcaaatcatggtctcat
ggtgaagttaaaaagcctgaaaccattaactaccgtacgttcaagccagaacgtgacggt
cttttctgtgccaaaatctttggtccagtcaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaactgcg
aaagttcgtcgtgagcgtatgggtcacatcgaattggcttcgccagttgcgcatatttgg
ttcttaaaatcattaccatctcgtatcggtcttcttttagacatgacgctacgtgatatc
gaacgcgtattgtatttcgaatcttatgttgtaactgatccgggtatgactccaatggag
aaataccaacttcttaacgatgaagaatacttcacagcgttagaagaacacggtgatgaa
tttagcgcgaaaatgggtgcggaagcgattcaagatttgttgaaagacatcgatcttgaa
gctgaaattgcacgtcttcgtgaagagattccacaaacaacttcagaaacgaagcttaaa
aaagcatcgaaacgtttgaagttgatggaagcattcaacgactcgaacaacaaaccagaa
tggatggtgttgactgtacttccagtacttccaccagatcttcgtccgttagtaccactt
gaaggtggtcgtttcgcgacttctgatttgaatgatctttaccgtcgtgtgatcaaccgt
aacaaccgtttgaaacgtcttcttgatctttcagcacctgacatcatcgtacgtaacgaa
aaacgtatgttgcaggaatctgtagatgcattgctagacaacggtcgtcgtggtcgtgcg
attacaggttcgaacaaacgtccattgaaatctttggcagatatgatcaaaggtaagcaa
ggtcgtttccgtcaaaacttgttgggtaaacgtgtcgattactctggtcgttcggtaatt
accgtaggtcctactttacgtcttcaccaatgtggtcttccgaagaaaatggcacttgaa
ttattcaagccattcattttcgctaaactacaagcctctggccaagcaacaaccattaaa
gctgcgaagaaaatggttgagcgtgaaacaccagaagtttgggacgttcttgcatctgtg
attcgtcaacatccagtgatgttgaaccgtgcgccaacacttcaccgtttgggtcttcaa
gcatttgaaccaaccctaattgaaggtaaagcgatccgtctacacccactcgtatgtgct
gcgttcaacgccgacttcgacggtgaccaaatggcggtacacgttccattaacacttgaa
gctcaattagaagctcgtgcgttaatgatgtcgaccaacaacatcttgtctccagcgaat
ggtgaaccgatcatcgtaccttctcaggacgttgtattgggcttgtattacatcactcgt
gatgcaatcaatgctaaaggtgaaggcatggtgttcgcggatactgatgaagtaaaccgt
gcactggcaactggtcaagttgatttacacgctcgtgttaaagcacgtgtacaccaaact
gtgattgatgacaacggtaatcgtgaacaacaaacgatcattgtagatacgacgccaggt
cgctgcctactttgggaagttgtacctgaaggtatggatttccaacagatcaacgttgag
atgaccaaaaagaacatctctaagattatcaactcttgctaccgtaagttgggtctaaaa
gatacggttatctttgctgaccaattgatgtacttaggcttccgtcaagcgacacgttca
ggcgtatcggttggtatggaagacatgcttattccacctgcgaaatatgcaattattgaa
aaagcagaagttgaagttcgtgaaatcgaacaacaattcgagcaaggtttcgtaactgca
ggtgaacgttacaataaagttgtcgatatttgggcacgtaccaatgaccaagtcgcgaaa
gcgatgatggacaacttgtcttataccactgttaaaaacaaacagggtgaagacgagaaa
caaaaatcgttcaactcaatctatatgatgtctgactcgggtgcccgtggttcggcagct
cagattcgtcagttggcgggtatgcgtggtttgatggcgaaaccagatggttcgatcatt
gaaaccccaattaaagcaaacttccgtgaaggtttgacagtacttcagtacttcatttca
acacacggtgcgcgtaaaggtttggccgatacagcactgaaaacagcgaactcaggttac
ttgacacgtcgtttagttgacgtagcgcaagacttggtgatcactgagccagattgcggt
actttagacggtcttgtgatgacaccgttcattcaaggtggcgatgttatcgaaaacttg
ggtgcacgagttttgggtcgtgtactggctgaagatgcgaagaaaccaggttctgacgaa
gttgttcttccacgtaacacattgatcgatgagaaacttgccaacttcctagaagacagc
ggtgtcgatgaagtgaaagtacgttcagttgtaaactgtgcctctaccttcggtgtatgt
gcgaaatgttatggtcgtgatcttgctcgcggtcacttggtgaatccaggtgaatctgtg
ggtgtaatggctgctcaatcgattggtgagccaggtacacagttaaccatgcgtacgttc
cacgtcggtggtgctgcgagccgaacttctgctgcaaacagcgtacaagttcgtaacggc
ggtacagtacgtttccacaatgtgaaaacagtacaacacgcgaaaggtcacttggtatct
gtatctcgttcaggtgaaatcggtattgctgatgacatcggtcgtgaacgcgaacgctac
aaacttccatacggtgcgtcaatcttgttgaaagatggcgaaacgatcgaagcgggtggt
attgttgcgacttgggatccgcatacacatccattggtaacagaagttgcaggtaaagca
cgtttcagccaaatcgctgatggtgtgacagcaacatcgaaaactgatgatgcaaccggt
atgaccactgttgaaatcctgcctgtaacagcacgtcctgcttcaggtaaagatttacgt
ccagcgattgtgttagacacagtggatggcggtgaacagttctacttcttaccacaaaac
accattgtgactgtccgtgatggagaaaccattggtgtgggtgacgttattggtcgtgta
ccacaagaaacttcacgtacacgtgacattaccggtggtctaccacgcgtagcggacttg
ttcgaagcacgtaaaccgaaagagcatgcaattcttgctgaaatttcgggtgttgtcagc
ttcggtaaagagaccaagggtaagaaccgtcttgtcatcactccagatgatggctctgag
atctacgaagagcttattccgaagtggcgtacaatcaacgtgttcgagggtgagcatgtc
aaccgtggtgaaaccatttctgatggtccacaaaacccacatgacatcttacgtttgaaa
ggcgaagttgcgcttacaaattacatcgtgaacgaagttcaagacgtataccgtctccaa
ggtgtaaaaatcaacgacaagcacattgaagttatcgtacgtcaaatgttgcgtaaagtt
gatatcactgacggtggtgatacaagctttatcaaaggcgagcaaattgactacatccgt
gtggttcaagaaaaccaagctgtggcagctcagaacaagttcccagcgaagtttgaacgt
caattgatgggtattaccaaagcatcgctttcaactgactcgttcatctctgctgcatcg
ttccaggaaactacgcgtgtgttaactgaagcggctgtaacaggtaaagaagacgaatta
cgtggcttgaaagagaacgtggttgtaggtcgcttgatcccagcgggtacaggtttggct
taccacttagaacgtcgtcgtcaagaagctgaagctgcagagcatgagcttgtaaatgac
ttctctgaagttgaccaagcattctctcaagcactaaacgaagatcaattctaa
DBGET
integrated database retrieval system
