Acinetobacter lanii: G8D99_14160
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Entry
G8D99_14160 CDS
T06989
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
alj
Acinetobacter lanii
Pathway
alj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G8D99_14160 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alj03021
]
G8D99_14160 (rpoB)
03400 DNA repair and recombination proteins [BR:
alj03400
]
G8D99_14160 (rpoB)
Enzymes [BR:
alj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G8D99_14160 (rpoB)
Transcription machinery [BR:
alj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G8D99_14160 (rpoB)
DNA repair and recombination proteins [BR:
alj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G8D99_14160 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
BSH_YknX
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
QIO10039
UniProt:
A0A6G8S776
LinkDB
All DBs
Position
complement(3105295..3109383)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPSVMDAPYLLAIQVDSYRTFLQDGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTQNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVILRALNYTNEQILDMFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDILDADGKAIVEQGKRINARHVRQMEASGLTKLAVPDEYLYERIT
AEDITLRDGEIVPANTVLSHDIMVKLAEGGVKQFNVLYTNDIDRGSFVADSLRADTTSGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREIEGILSNEDIIDVLKTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANNFGFLETPY
RKVVDGRVTMDVEYLSAIEEVGTVIAQADSAVDAEGNLTEEFVSVRHQGDFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLIADKPLVGTGMEANVAHD
SGVCVIAKRGGRIEFVDASRVVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQKVLV
SLGDKVGRGDVLADGPSTDGGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVSAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVSSSVKGTVIDVQVFTRDGIEKDERAQAIEKA
QLDAYRKDLKEEFKIFEEAARERIVRLLKGQESNGGGTTKRGDKLSEEVLSGLELVDLLD
IQPVDEGIAERLTQIQVFLKEKSIEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDQIDKMMKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDEEILVLSGNLRKGVP
LATPVFDGADESQIKELLELGGISRTGQTVLYDGRTGERFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgcctagc
gttatggatgctccgtacttgctcgcgattcaagtcgactcgtacagaacgttccttcaa
gacggcaaaacaccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttccaattgaaagttattctgggaatgctgctttagaattcgttgagtatagccttggt
aaacccgagtttgatgtacgcgaatgtattctacgcggatcaacttatgcggcaccaatg
cgcgttaaaattcgtctgatcattaaagatcgcgaaacgaaatcgatcaaagacgtacgt
gaacaagaagtgtacatgggtgaaatgccacttatgacacaaaacggtacctttgtgatc
aacggtactgaacgtgtaatcgtatctcagttacaccgttcaccaggtgtgttctttgac
cacgataaaggtaagacgcattctagcggtaaagtgctttattcagcacgtattattcct
taccgtggttcatggttagatttcgaatttgacgcaaaagaccttgtctacgtacgtatt
gaccgtcgtcgtaaattacttgcgactgtgattcttcgtgcgttgaactatacaaatgaa
caaattctagacatgttctatgagaaagttcctgtatacctcgacatgggcagttaccaa
attgaccttgtgcctgaacgcctgcgcggtgaaatggctcaattcgacattctcgatgct
gacggcaaagcgattgttgaacaaggtaaacgtattaatgcacgtcatgttcgtcaaatg
gaagcgtctggcttaaccaagcttgctgttccagatgaatacttgtacgagcgtattact
gctgaagatatcaccttacgtgacggcgaaatcgttcctgcaaacaccgtacttagccat
gacattatggtgaaattggctgaaggtggcgttaaacaattcaacgtactttataccaat
gacatcgaccgtggttcattcgtcgctgattctttacgtgcagacacgacttctggtcgt
gaagaagcgcttgtagaaatctacaaagtaatgcgtccaggcgagccaccaacaaaagaa
gcagcagaaaacttgtttaacaacttgttcttctcttctgaacgttatgacttgtctcca
gtcggtcgtatgaagttcaaccgtcgtttgggtcgtccttacgaagtcggtacagatcaa
aaatctcgtgagattgaaggtattctttcaaacgaagacatcattgatgtattgaaaacg
ttggttgaaatccgtaacggtaaaggcgaagtcgacgatatcgatcacttgggtaaccgt
cgtgttcgttcagttggtgaaatgactgagaaccaattccgtgtaggtctggttcgtgtt
gaacgtgctgttaaagagcgtttaagccaagctgaaacagataacttgtctccgcaagat
ttaatcaatgcgaagccagttgctgctgcaatcaaagaattctttggttcaagccaattg
tcacagttcatggaccaaaataacccgttgtctgaaatcacgcataaacgtcgtgtatca
gcattagggccaggtggtttaacacgtgaacgtgcaggcttcgaagtacgtgacgtacat
caaacgcattatggtcgtgtatgcccaattgagacacctgagggaccaaacattggtttg
atcaactcattgtctgtgtatgcaaaagccaacaattttggtttcttggaaacaccatat
cgtaaagttgtagacggccgtgtcaccatggacgttgaatacctttctgcaattgaagaa
gtcggtactgtcattgcacaggccgattctgcagtagatgctgaaggtaacttaacagaa
gaattcgtatctgtacgtcaccaaggtgacttcgtacgtatgcctcctgaaaaagtaacg
catatggacgtctctgctcagcaggttgtttctgtagctgcatcattgattccattcctt
gagcacgatgacgccaaccgtgcattgatgggttcaaacatgcaacgtcaggcagttcct
accctgattgctgacaagccgcttgttggtacaggtatggaagcgaatgtagcgcatgac
tctggtgtatgtgtaatcgcgaaacgtggtggtcgtatcgagttcgttgatgcgtcgcgt
gtggttattcgtgtgaatgaagacgaaatgatcgcaggtgaagcaggtgtagatatctac
aacttgatcaaatacacgcgttcgaaccaaaacacctgtattaaccaaaaagtactcgta
agcctaggcgataaagttggtcgtggtgacgtacttgctgatggtccatcgacagatggc
ggtgaattggcactgggtcaaaacatgcgtgtcgcgttcatgacgtggaacggttacaac
tatgaagactcgatcttactttctgagcgtgttcttcaagaagatcgcttaacttcgatt
catattcaagaattgtcatgtgtagcgcgtgatactaagttaggtgcagaagaaattact
gccgatattcctaacgtcggtgaagctgcactttctaagcttgatgaatcaggtattgtt
tacatcggtgctgaagtatctgcaggggatatccttgtcggtaaagtaacacctaaaggt
gaaacgcaattaacacctgaagaaaaactgcttcgcgcgatcttcggtgaaaaagcggct
gacgttaaagactcatctttacgcgtatcttcatctgtaaaaggtacagtaattgacgtt
caagtgtttacacgtgacggcattgagaaagatgaacgtgctcaagcgattgagaaagct
caacttgatgcgtaccgtaaagacttgaaagaagaattcaaaatctttgaagaagcagca
cgtgaacgtattgttcgcttgttgaaaggtcaagaatcgaacggtggtggtaccactaaa
cgtggcgacaaactttctgaagaagtgttgtcaggtttagaacttgttgacttgttggat
atccaacctgttgatgaaggtattgcagagcgtttaactcaaattcaagtgttcttgaaa
gagaagagcattgaaattgatgagaaatttgcggagaaaaaacgcaaactttctacaggc
gatgagctgacaacgggtgtattgaaagttgttaaagtgtacttggctgttaaacgtcgc
atccaaccgggtgacaaaatggcgggtcgtcatggtaacaaaggtgttgtatcaaacatc
ttaccagtagaagacatgccacatgatgctaacggtgttccagttgatatcgtgttgaac
ccactgggtgtaccatcacgtatgaacgtgggtcagattcttgaaactcacttgggtatg
gcggcgaaaggtcttggcgatcaaatcgacaagatgatgaaagagcaacgtactgtactt
gagcttcgtgaattcttagacaagatttataacaaagttggtggcgagcaagaagatctt
gatagcttaactgatgaagagatcttggtattgtcaggtaaccttcgtaagggtgttcca
cttgcaacacctgtattcgacggtgctgacgaatcacaaattaaagagcttctagaactt
ggtggcatctcacgtacaggtcaaactgtattgtatgatggtcgtacaggtgagcgtttt
gaccgtcctgtaactgtaggttacatgtacatgttgaaactgaatcacttggttgatgac
aagatgcatgcgcgttctaccggttcttactctcttgttacgcaacagccattgggtggt
aaagctcaattcggtggtcagcgtttcggtgagatggaggtctgggcacttgaagcatac
ggcgcagcttacacgcttcaagaaatgcttactgttaagtcggatgacgttgaaggtcgt
acccgtatctacaagaacattgtagatggtaaccattatatggatccgggcatgcctgaa
tcgttcaacgtattgactaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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integrated database retrieval system
