Poseidonibacter lekithochrous: ALEK_0409
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Entry
ALEK_0409 CDS
T06860
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alk
Poseidonibacter lekithochrous
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alk03016
]
ALEK_0409 (truB)
Enzymes [BR:
alk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ALEK_0409 (truB)
Transfer RNA biogenesis [BR:
alk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ALEK_0409 (truB)
Prokaryotic type
ALEK_0409 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QKJ21712
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Position
410947..411795
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AA seq
282 aa
AA seq
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MQKRLYNKEPLNKLLVGNKPMFMSSNSYLNRIKRKYKNKKAGFSGTLDPFANGCLIIAFG
QYSKLFKYMAKTPKSYRAVVWLGAQSESLDTENMISIEDEKKIDLTLIKNEIENLVGTHE
YYPPKFSAKKIDGKRAYDLAREGIEFEMKKSSMTITNTKFISYNHPFITFESTVTEGSYI
RSLAQILLEKLNSKGTLSYLRRLNEGKFFYENEKDLNPLDYIDLERNKYSGTKEWLFDGK
KISIDYLERKDDGKYLIVFDDFFSIIEIENNEVTYLLNKVTL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaaagactttataataaagaacccctaaataaactattagttggtaataaacca
atgtttatgagttcaaactcttatttaaatagaataaaaagaaaatacaaaaataaaaag
gctggtttctcaggaactttagatccttttgctaatggatgtttgattattgcatttggg
caatactcaaaactttttaagtatatggctaaaacacctaaatcatatagagctgttgta
tggttgggagctcaatctgaatctttagatactgaaaatatgattagtatagaagatgag
aaaaagattgatttaactttaatcaaaaatgaaatagaaaacctagtaggtacacatgaa
tattaccctcctaagttttctgctaaaaagattgatggaaaaagagcatatgacttagca
cgagagggtattgagtttgaaatgaagaagtcttctatgactattactaacacaaagttt
atttcttataatcatccctttataacttttgaatctacagttacagaaggctcatatata
agaagtcttgctcaaatattactagagaagttaaactctaaaggaactctatcttattta
agaagacttaatgaaggtaaattcttttatgagaatgaaaaagacttaaatcctttagat
tatattgatttagaaagaaataaatactcaggtacaaaagagtggctttttgatggtaaa
aagatttctattgattatttagaaagaaaagacgatggtaaatacctaattgttttcgat
gacttttttagtataattgagattgaaaataacgaagttacatatcttcttaataaggtt
actttatag
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