Poseidonibacter lekithochrous: ALEK_0420
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Entry
ALEK_0420 CDS
T06860
Symbol
addB
Name
(GenBank) AddAB recombination complex, helicase AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
alk
Poseidonibacter lekithochrous
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_0420 (addB)
Enzymes [BR:
alk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ALEK_0420 (addB)
DNA repair and recombination proteins [BR:
alk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ALEK_0420 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QKJ21723
LinkDB
All DBs
Position
418328..420697
Genome browser
AA seq
789 aa
AA seq
DB search
MLLKQKLFVFPTSRSIRSFINEQKSKSTLLPFTLTIDELFKKSIILENKKYIDEEERFLF
LKESIKSIDVSKLGISDNFTKFLKQNEYIYRFFLELASEKVDINDIKIADTYDYYYEHLE
ILSSIKDNYIKKLNENNCVDRLNIHEHFKINEKFLNKFSSIDLVFEGYFTKVEFDIIHAI
SNVIDLNIEFHSNEYNQKSIDVFRDLFDEDFELNKKYKISLKSKKILEVSEIINKVNSLE
IKGFTSRINQIAYIKSSITKCVQDGIDPSTIALILPDESFASQLQLFDNEKYFNYAMGKD
IKNYRLYEVAYSIHSYLNEHEIKNEKNLEYLKIDKIFIEKNIKVKWNKICTKEIFTFVCD
FVRSCENNAEILEKYDEIIYKLNILLFSSNNEILLKDIYKIFLLRISEIKLDDVNAGKVT
VLGLLETRAVNFETIIICDFNENFIPKKSIKDKFLSTKIKQMTKLPTSFDRELLQKYYYK
RLIESSKNIFISYVNSASNQISRFANELFPKSIDEKIYDNYYRHILYNNHNISHFDENII
QRVDLTKITWSASSLKIFLQCKRKFYLQYILKLKEHTISLKPKAFELGDIVHSILEDYYK
IDENSDDLTYERIERLFTKYTTSNPFLLLDLEIWKKKLYEFYLYDLKRLENRKIIGLERS
FDIEFEGFKLKGIIDRVDQQDDTYEVLDYKTSSALKVDTLKNYEKSSDFQLEFYYLAMSE
IYKTDKVNVYYYDLHNTKLIEEIALDKKLELLVEVFNSLKEMSNKEISFNKCEDKAVCNF
CIYNTICDR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttaaacaaaaactttttgtctttcccacatctagatctataagatcttttatt
aatgagcaaaagagtaaatcaactcttttgccatttacacttacaattgatgagcttttt
aaaaagtctattattttagaaaataaaaaatatattgacgaagaagaaagatttctcttc
cttaaagaatcaattaaaagtatagatgtatcaaaattaggtatatctgataactttact
aagtttctaaaacaaaatgaatatatttataggtttttcctagagcttgcaagtgagaaa
gtagatataaatgatattaaaattgctgatacatatgattattattatgaacatttagaa
atattatcatcaattaaagataattatattaaaaaattaaatgaaaataattgtgtagat
agattaaatattcatgaacattttaaaattaatgaaaagtttttaaataaattttcttca
attgatttggtatttgaaggatattttactaaagtagaatttgacattatacatgctata
tctaacgtaattgatttaaatattgaatttcattcaaatgaatataatcaaaaatcaatt
gatgtatttagagatttatttgatgaggattttgaacttaataaaaaatataaaatatca
ttaaagagtaaaaaaattctagaggtctcagaaataataaataaggttaattctttagaa
ataaagggatttacttcaagaataaaccaaattgcctatataaaatcttcaattactaaa
tgtgtacaagatggaattgatccctctactatagcacttatattacctgatgagagtttt
gcttcacaattgcagttatttgacaatgagaagtactttaactacgctatgggtaaagat
attaaaaattatagattgtatgaagttgcatatagtattcacagctatttaaatgaacat
gaaataaaaaatgaaaagaatttagaatatttaaaaatagacaaaatattcatagaaaag
aatataaaagttaaatggaataagatttgtacaaaagagatttttacttttgtatgtgat
tttgttcgttcttgtgaaaataatgctgagatattagaaaaatatgatgaaataatatat
aaactaaatatattacttttctcaagtaataatgagatacttttaaaggatatatataaa
attttcttactaagaatttcagaaatcaaacttgatgatgttaatgcagggaaagtaact
gttttaggtttattagaaacaagagctgtaaattttgaaactataattatttgtgatttt
aatgaaaattttattccaaaaaaatctattaaagataaatttttatcaacaaaaattaaa
cagatgactaaattacctacttcttttgatagggagttattacaaaaatactattataaa
agattaattgagtcatcaaaaaatatatttatttcttatgttaattcagcttctaatcaa
atatctagatttgcaaatgagttatttcctaaaagtatagatgaaaaaatatatgataat
tattatagacatattttatataacaatcataatatctcacattttgatgaaaatattata
caaagagttgatttaacaaaaatcacttggtcagctagttcactaaaaatattcttacaa
tgtaaaagaaaattctatttacaatatatattaaaactaaaagagcacacaatatcatta
aaacctaaagcctttgaattaggtgatattgtacattctattcttgaagattattataaa
attgatgagaattcggatgatttaacttatgagcgaattgaaagattatttacaaaatat
acgacatctaatccatttttattattagatttagaaatatggaaaaagaagttatatgaa
ttctatttatatgatttaaaaagacttgagaatagaaaaattataggactagagaggtct
tttgatatagaatttgaaggttttaaattaaaaggtataatcgatagagttgatcaacaa
gatgacacttatgaagtcttagattataagacttcaagtgcattaaaagttgacacatta
aaaaattatgaaaagagtagtgacttccagttagagttttattatctagcaatgagtgag
atttataaaacagataaagttaatgtttattattacgatttacataatacaaagcttatt
gaagaaattgctttagataaaaaattagaactattagttgaagtttttaatagtttaaaa
gagatgtcaaataaagaaatttcttttaataaatgtgaagacaaagcagtttgtaatttt
tgtatttataatactatttgtgatagataa
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