Poseidonibacter lekithochrous: ALEK_1257
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Entry
ALEK_1257 CDS
T06860
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
alk
Poseidonibacter lekithochrous
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alk03009
]
ALEK_1257
Enzymes [BR:
alk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ALEK_1257
Ribosome biogenesis [BR:
alk03009
]
Prokaryotic type
rRNA helicases
ALEK_1257
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
DUF460
Motif
Other DBs
NCBI-ProteinID:
QKJ22536
LinkDB
All DBs
Position
1289331..1290695
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AA seq
454 aa
AA seq
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MNFTKLNLNKSFLSNLESLGFKSMTQIQELSLPLLLENKDVIAQAKTGSGKTVSFGIPLV
NKLDVKNFRIQSLVLAPTRELANQIAVEIRRLSRHIHNVKVLTLTGGVPYNPQVSSLFHG
AHIIVGTPGRVLKHIKEENINFENLNTLVLDEADKMLDMGFFEDISTIIESLPQNRQSML
FSATYEEGIEKLSKGVLNNPTMVEAVVTEKVSIEQRFYEVQESTKVSLISPLISSNKAKS
ILIFCNTKIKCDEVADELDALGLDVLTLHSDLDQRDRDEIITLFSHKSYPILIATDVASR
GLHIDDIDLVINYDLARDEKVHTHRIGRTARAGKGGLAVSLYTEYEDDKVDEIKDFFDDI
KFDNITNIEDDLTFKIDSDYRTLFINGGKKQKLRAGDILGALTAGCGLPKDSIGKINSMD
FCSYVAVKKEYIKKAFDGLSNNKIKGKYFRIFEK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgaactttacaaaattaaatttaaataagagtttcttatcaaacctagaatctttaggt
tttaaaagtatgactcaaatacaagaactttctttacctttacttctagagaataaagat
gttattgctcaagcaaaaacaggttctgggaaaacagtatcttttggaattcctttagtg
aataaattagatgtaaaaaactttagaatacaatctttagttcttgcacctacaagagaa
cttgcaaaccaaattgcagtagaaattagaagattatcaagacatatccataatgtaaag
gttcttacattaacaggtggagttccatataatcctcaagtatcttctttattccatgga
gcacatattattgttggaactccaggaagagtattaaaacatattaaagaagaaaatatt
aattttgagaatctaaacactttagtattagatgaagcagataaaatgttagatatggga
ttctttgaagatatcagcactattattgaatcacttcctcaaaacagacaatctatgtta
ttctctgcaacttatgaagaaggaattgaaaaactatctaaaggtgttttaaataaccca
acaatggtagaagcagtagtaacagaaaaagttagtattgaacaaagattctatgaagta
caagaaagtactaaagtatctttaatttcacctctaatttcatcaaataaagcaaaatct
attttaatcttctgtaatactaaaatcaaatgtgatgaagtagcagatgaattagatgct
ttaggattagatgttcttacattacactctgatttagatcaaagagatagagatgaaatt
attactttattctctcataagtcatatcctatattaatagcaacagatgtagcctcaaga
ggtttacatattgatgatattgatttagtaattaattatgatttagctagagatgaaaaa
gtacatactcatagaatcggtagaacggcaagagctggaaaaggtggattagcagtttca
ttatatactgaatatgaagatgataaagttgatgaaattaaagatttctttgatgatatt
aagtttgataatatcactaatattgaagatgatttaacattcaaaattgacagtgattat
agaacactatttattaatggtgggaaaaaacaaaaactaagagctggagatattcttgga
gctttaactgctggatgtggtttaccaaaagatagtattggtaaaatcaattcaatggat
ttttgttcttacgtagcagtaaaaaaagaatacataaaaaaagcttttgatggattaagc
aataataaaatcaaaggtaaatatttcagaatatttgaaaaatag
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