Poseidonibacter lekithochrous: ALEK_1548
Help
Entry
ALEK_1548 CDS
T06860
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
alk
Poseidonibacter lekithochrous
Pathway
alk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ALEK_1548 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_1548 (priA)
Enzymes [BR:
alk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ALEK_1548 (priA)
DNA repair and recombination proteins [BR:
alk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALEK_1548 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_19
UvrD-helicase
nSTAND3
DUF1258
AAA_30
zf_C2H2_13
RelE
IBR_1
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QKJ22819
LinkDB
All DBs
Position
1596673..1598520
Genome browser
AA seq
615 aa
AA seq
DB search
MLYYELALLKSPLANLTYQSETQIEIGTKVQVKLQRRKNLNDAVVIKEVEKPSFKCVNIE
EITSEYYDDKMLQVSNFISQYYVSSLGEALSIYNAYNSEYKAQENEIKIDCDIDLSKEQQ
EAFDFLNNKKQALLFANTGSGKTEIYIKVIEQHIKEGKQAVLLMPEISLTPQMQKRLEKV
FGESIAIWHSKITKKKKETILQGLQEGSIKLIAGARSALFLPYSNLGAIIVDEEHDESYK
SDSKPRLHTKDLSIYMAKKLDIQLVLGSATASAGSFSKVPFFRLDKTFYDTSKQYEFDEG
ESCLTSKIVNKIGSTLDTDNQVIVFLPTRANFKYQICTSCGKSVECPYCSVSMSLHKNSL
ALKCHYCGYAQRIPETCPSCKTGIIHNLRVGTAQIEEELKEIFPQKVVKRFDRDEVRTDK
QLKTILNEFNKGEIDILVGTQMLSKGHDYHNVKLAVVIGIDSVLNMNSYKARERALSLLI
QISGRSGRKGDGEVIIQTKNEEFFNYYLNESNYQDFLETELEFREDLYPPYLKMAKIVFA
HANGIKVKQELDKYITILKARENIEVVGFGECAIFKMANKYRYEIVIRSKNVKAMLTTLH
SVTSPMASVDMDTIY
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgttatattatgaattggctttactaaaatctccacttgcaaatcttacttatcaaagt
gaaactcaaatagaaattggtacgaaagtacaagttaaactacaaagaagaaaaaatcta
aatgatgcagttgttattaaagaggttgaaaaaccatcttttaaatgtgtaaacatagaa
gagataacaagtgaatattatgatgataaaatgcttcaggtatctaattttatttctcaa
tattatgttagttcattaggtgaggcattaagtatctataatgcatataatagtgagtat
aaagcacaagagaatgaaatcaaaattgattgtgatatagatctatcaaaagaacaacaa
gaagcatttgattttttaaataataaaaaacaagctttgctttttgcaaacactggttca
ggaaaaacagagatttatatcaaagttattgagcaacatataaaagagggaaaacaagct
gttttattaatgccagagatttctcttactcctcaaatgcaaaaaagacttgaaaaagtt
tttggtgaaagtattgctatatggcattcaaaaattactaaaaagaaaaaagagacaatt
cttcaaggtttacaagaaggtagtattaaattaattgcaggagctagatctgcacttttt
ttaccttatagtaacttaggagctattattgtagatgaagagcatgacgagtcttataag
agtgattctaagccaagattacatacaaaagatttaagtatctatatggccaagaaatta
gatattcaattagttctaggtagtgctactgcttctgctggatctttttcaaaagttcca
ttttttagattagataaaaccttttatgatacttctaaacagtatgaatttgatgaaggt
gagtcatgtcttacttcaaaaattgtaaataaaattggaagtactttagatacagataat
caagttattgtttttcttccaacaagagcaaacttcaaatatcaaatttgtacttcttgt
ggtaagtctgttgagtgtccttattgttctgtttctatgagtttacacaaaaattcatta
gctttaaaatgtcactactgtggttatgcgcaaagaatacctgaaacttgtccttcttgt
aagactggaattattcataacttgcgagttggtacggcacaaatagaagaagaactaaaa
gaaatattccctcaaaaagtagtaaaaagatttgatagagatgaagtacgaacggacaaa
caattaaaaactattttaaatgaatttaataaaggtgaaatagatattttagttggaact
caaatgctttcaaaaggtcacgattaccataatgtaaaattagctgttgtaattggaatt
gattctgttttaaatatgaattcatataaagcaagagagagggctttatctttattaatt
caaatctcaggaagaagtggaagaaaaggtgatggagaagtaattattcaaactaagaat
gaagagttctttaactactatttaaatgagtcaaattaccaagactttttagaaactgaa
cttgaatttagagaagatttatatcctccatatcttaaaatggcaaaaattgtttttgct
catgccaatggtattaaagtaaaacaagaacttgataaatatattactattttaaaagct
agagaaaatatagaagttgttgggtttggagaatgtgctatttttaagatggcaaataaa
tatagatatgaaatagtaattagatctaaaaatgtaaaagcaatgcttactaccttacat
agtgtaacttctcctatggcatctgtagatatggatactatatactaa
DBGET
integrated database retrieval system
