Poseidonibacter lekithochrous: ALEK_2046
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Entry
ALEK_2046 CDS
T06860
Name
(GenBank) SbcCD-like exonuclease, ATPase subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
alk
Poseidonibacter lekithochrous
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_2046
DNA repair and recombination proteins [BR:
alk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALEK_2046
Archaeal homologous recombinant proteins
ALEK_2046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_15
SbcC_Walker_B
AAA_21
AAA_27
ABC_ATPase
AAA_5
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QKJ23309
LinkDB
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Position
complement(2154653..2157022)
Genome browser
AA seq
789 aa
AA seq
DB search
MILCKLKLENFKKYSYYSMEFNQGLIGIIGKNGSGKSTIFEAILFALYGELKNKGYKEVI
RNANATTKDAVVVELDFEFEGIEYRVSREFRGKALSANAKFYKTDELITTGAKEVTASII
NLTKMSKDAFLHTLFASQKELTSLSSLKNEDRKKMIRKLLGLEKIDFIEKELVEKSRELK
REIAAFAEVLLSDEEVQSKTEHIQEYKNKTQDLETDVELRAKEVDSIKLLELDIKKELES
YQKSKEQKQDLYSKCELLKSTINSHIQRQSNLSEEVSKLELKQTELRGLESVKSEYVVLH
DKLKEQDKLKEYYIRKQSLVEEQTNLREHYTKSRDTIRRLENETSQHQEFAQKEKEFESQ
LEELQKQLESLNNKERELLNHIAGEEKLIKDINSKIDNIKNLGAGSDCPTCTRPLLDEYD
SVLASLECIVNNTQRDKIEIAKQECKEIQKSKKTYEDKKTIVSKEHFELSKTINLMESKK
RDLQKENEHFEKVEAQGLKNKEELFKLESYEYDKKTHEDLLEEQKELKSKYEYVLSLETM
LQRLDSIKEELKQTSTNIEKLNNDYNEKELEYKSVNYDEVKHKQKQKESDEVSANKEKKL
NQLNELKVQIATIQGQIKTIQQSLDNNSIQLAKVQDKKDDLIDYEKIKISLGDFKTKLNA
KVAPRISDIASNMYSLITKGKYQHIEVSNDFDFYIYDEGRKFPIERFSGGEVDLANLVLR
IAISKTLTELSGASSIGFLAFDEVFGSQDEARRMEILEAFHTIKEQYRQIFLISHEMEIK
EMFESVVEL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatactgtgtaaactaaaactagaaaacttcaaaaagtactcatattactctatggag
tttaatcaaggtcttataggaataatagggaaaaacggtagtggtaaatctacaatcttt
gaagcaatactatttgctttatatggtgagcttaaaaacaaagggtataaagaagtaata
cgaaatgcaaatgcaactacaaaagatgcagtagtagtagaactagactttgagtttgag
ggaatagagtatagagtaagtagagagtttagaggaaaggctcttagtgctaatgcgaag
ttctataaaacagatgagcttataacgacaggagccaaagaagttacagcttctattata
aatcttacaaagatgagtaaggatgcatttttacatacactatttgcttctcaaaaagaa
ctaacatctttaagtagtctaaaaaacgaagatagaaaaaagatgattagaaaactacta
ggtttagagaagatagactttatagaaaaagaactagtagagaaaagccgtgaactaaaa
agagaaatagcagcttttgcagaagtactactaagtgatgaagaagtacagagtaaaaca
gaacatatacaagaatacaaaaataaaacccaagacttagaaacagatgtagagttaaga
gctaaagaagtagatagtataaagctattagagctagatatcaaaaaagagttagaatca
tatcaaaagagcaaagagcaaaaacaagacttatactctaaatgtgagttattaaaaagt
actataaactctcatatacaaagacaaagcaatctaagcgaagaagtaagcaaactagaa
ttaaaacaaacggaactacgaggcttagaatctgtaaagagtgagtatgtagtactacat
gataaactaaaagaacaagataagctaaaagaatactatataagaaaacaaagcttagta
gaagagcaaacgaacttacgagagcactatacaaagtcaagagatactataagaagacta
gagaatgaaacaagccaacatcaagagtttgcccaaaaagaaaaagagtttgaatcacaa
ctagaagaactacaaaaacaactagaatctctaaataataaagagagagaactactaaat
catatagcaggggaagagaaactaataaaagatattaattcaaagattgataatatcaaa
aacttaggagcagggtctgattgtcctacttgtactagacctttacttgatgagtatgat
agtgtattagcttcattggagtgtatagtaaataatactcaaagagataagatagaaata
gcaaaacaagagtgtaaagagattcaaaagtcaaagaaaacttatgaagataaaaagaca
atagtttcaaaagagcattttgaactatcaaagactattaatctaatggagagtaagaag
agagacttacaaaaagaaaatgagcactttgaaaaagtagaagctcaaggtcttaagaat
aaagaagaactgttcaaactagaatcttatgagtatgataagaaaacacatgaggactta
ctagaagagcaaaaagagctaaagtctaagtatgagtatgtactaagcttagaaactatg
cttcaaagactagatagtataaaagaagagttaaaacaaacaagtacaaatatagaaaaa
ctaaacaacgattataatgaaaaagagctagaatataaaagtgtgaactatgatgaggta
aaacacaaacaaaagcaaaaagaaagcgatgaggtaagtgcgaataaagagaaaaagcta
aatcagctaaatgaactaaaagtacaaatagccacaatccaaggtcaaatcaaaacaatc
caacaaagcttggataataacagtatccaactagccaaagtacaagataaaaaagatgat
ttaatagactacgaaaaaatcaaaataagcctaggggatttcaaaacaaaactaaatgcc
aaagtagctccaagaatctcagatattgcctcaaatatgtatagcctaatcacaaaagga
aaataccaacatatagaagtatcaaatgactttgatttttatatctatgatgaaggaaga
aaattcccaattgagagattctcagggggagaagtagacctagcaaacctagttctacga
atagcaatatctaaaactctaacagaactaagtggagctagtagtattggattcctagct
tttgatgaagtatttggaagccaagatgaagcaagacgaatggaaatcctagaagccttc
catacaatcaaagaacaatatagacagatatttttgatatcacatgagatggaaataaaa
gagatgtttgagagtgtggtggagttgtaa
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