Poseidonibacter lekithochrous: ALEK_2094
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Entry
ALEK_2094 CDS
T06860
Name
(GenBank) DEDDh 3'-5' exonuclease domain family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
alk
Poseidonibacter lekithochrous
Pathway
alk03030
DNA replication
alk03430
Mismatch repair
alk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ALEK_2094
03430 Mismatch repair
ALEK_2094
03440 Homologous recombination
ALEK_2094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alk03032
]
ALEK_2094
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_2094
Enzymes [BR:
alk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ALEK_2094
DNA replication proteins [BR:
alk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ALEK_2094
DNA repair and recombination proteins [BR:
alk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ALEK_2094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2779
HCNGP
HI1480
Motif
Other DBs
NCBI-ProteinID:
QKJ23355
LinkDB
All DBs
Position
complement(2212450..2212977)
Genome browser
AA seq
175 aa
AA seq
DB search
MIILDFETNSQNIGDVIEVAAVRLEVVNNEYKVVDKFHRYYLSRYPVNFYSYAVHRLTPE
LILEHRADKEYSSYFTEDEDFIDFCREANTLVAHNISFELRHIDKMAFFSNHICTMKENK
KLVKSLNKKGNIKNPSLDEVCDFFDIEFDESSHHSATYDVSKTFEILRKMNLENS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgataattttagactttgagacaaatagtcaaaatataggtgatgtaatagaagtagct
gctgttagactagaagtagtaaataatgaatataaagtagtagataaattccatagatac
tatttatcacggtatcccgttaacttttactcttatgcagttcatagattaacacctgag
ttaattctagagcatagagcagataaagagtactcttcttattttacagaagatgaagat
tttattgatttttgtagagaagctaatactttggtagctcataatattagttttgaatta
agacatattgataaaatggcttttttctcaaatcatatctgtacaatgaaagagaataaa
aaattagtaaagtctttgaataaaaaagggaatattaaaaacccaagtttagatgaggtt
tgtgatttttttgatattgagtttgatgagtcttcacaccatagtgcaacctatgatgtt
tcgaaaacttttgagattctaagaaagatgaacttagaaaatagttag
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