Poseidonibacter lekithochrous: ALEK_2136
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Entry
ALEK_2136 CDS
T06860
Name
(GenBank) helicase, RecD/TraA family (non-RecBCD)
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
alk
Poseidonibacter lekithochrous
Pathway
alk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ALEK_2136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_2136
Enzymes [BR:
alk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ALEK_2136
DNA repair and recombination proteins [BR:
alk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALEK_2136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
HHH_RecD2
AAA_19
UvrD_C_2
Viral_helicase1
SH3_13
OB_YrrC
HHH_5
PIF1
Ribosomal_S13
AAA
PhoH
Mg_chelatase
AAA_5
AAA_22
T2SSE
NB-ARC
AAA_16
AAA_33
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QKJ23396
LinkDB
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Position
complement(2256913..2259240)
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AA seq
775 aa
AA seq
DB search
MADNQQEYKTFKLSGVLKKVLYQNDETKYIIAVLENNQKICGAYFDTDIEKIVGEEILLI
GNWTTHKKYGVQFEFDTLELKEAEIFFFLTKIVKGIGKKFAHELLEKYDEEELVKILNEK
PEELLQFKGIKEKKLKTIVSSWQKFKHLRELGSFLAQYGVTSNLITKIYSSLGEIDNLIE
KIKKNPYMLINIKGIGFKRADEIAKALGLDPRSEFRIMACLNYTLKEYCDNNGNSSIDKF
HLYKLLDESLRFNNEEVLYEEAVSKMLVEEEIFVTKENRYALSMLYHAEKRILEFFQRRE
NEQNKKIIAAFDTYLEKKQKTLGFDLSEEQKKAVELINDGHKTLFLIGYAGTGKSTSSRA
ILELLEEIVSYDDVMTIALSGIASQRISDTTGYNSSTIQSMLMKHKEKDFFPYKVILLDE
ASMVNSVTFYQIISKIDDDTIFIIVGDDGQLPAIGAGNILADAIKYELAPICKLTKIYRQ
NENQAIAVIANDIRKGEVPKYNEDYEDFKFYNVSISNYYAQKNSASSNDFADIRGENSTL
ILNNILNISSSYIQKYYDLIKAKEINKALTLFQVITPMKGGLLGVENLNMQLQKLFNHTK
GMAYQTKLYEYKITDKVIHIKNENMRSQTMSMYKSGSTDFLEKRVFNGQLGLIIKLDFEE
EKCIVLYPNDDMVVFYAFENISSLLSLAYCLTIHKTQGMEYENALIPMSFSHYIMHNTKL
LYTAITRAKKMCFIVGEEEAFKSACKKLEITIRESVINDMLSKAKVPQRELLEEL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcagataatcagcaagaatataaaacttttaaactctcaggagtccttaaaaaagta
ctataccaaaatgatgaaacaaaatatattattgctgttttagaaaacaatcaaaaaatt
tgtggagcttactttgatactgacattgaaaaaattgttggtgaagaaattctattaatt
ggtaattggacaacacataaaaaatatggggttcaatttgaatttgatacgttagaatta
aaagaagcagaaattttctttttccttacaaaaattgtaaaaggaataggcaaaaaattt
gcccatgaattattagaaaaatatgatgaagaagaacttgtaaaaatactaaacgaaaaa
cctgaggagttactacaattcaaaggtattaaagaaaaaaaactaaaaactattgtctca
tcatggcaaaaattcaaacatttacgtgaattaggatctttccttgcccagtatggcgta
acatcaaatttaattacaaaaatttattctagtttaggtgaaatagataacctaattgag
aaaataaaaaagaatccatatatgcttattaatataaaaggtattggatttaaaagagca
gatgaaattgcaaaagccttaggacttgaccctcgaagcgaatttcgaattatggcttgt
ttgaattatactttaaaagagtattgtgataacaatggaaattcatctattgataaattt
catttatataaacttttagatgaatcattaagatttaataatgaagaagttttatatgaa
gaagcagtatcaaaaatgcttgtagaagaagaaatttttgtgactaaagagaatagatat
gctttatctatgttgtatcatgctgagaaaagaattttagagtttttccaaagaagagaa
aatgaacaaaataaaaaaatcattgcagcctttgatacttacttagaaaagaaacaaaaa
acactaggttttgatttaagtgaagaacagaaaaaagcagttgaattaattaatgatgga
cataaaacacttttcctaataggttatgcaggaactggtaaatctacatcaagtagggct
atattagagctacttgaagagatagtatcttatgatgatgttatgactatagctttaagt
ggtattgcttctcagagaatctctgatactacaggatataactcttctacaattcaatca
atgcttatgaaacataaagagaaagatttttttccttataaagtaatacttctagatgaa
gcctcaatggttaactctgttactttctatcaaataatttcaaaaattgatgatgatact
atttttataatcgtaggtgatgatggacagttacctgctattggtgcgggtaatattctt
gctgatgcaattaaatatgaattagctccaatttgtaaattaacaaagatttatagacaa
aatgaaaatcaagcaattgcagttattgcaaatgatattagaaaaggggaagttcctaaa
tataatgaagattatgaagactttaaattttataatgtttcaatatcaaattattatgct
caaaaaaactctgcttcttctaatgattttgctgatattagaggtgaaaactcaactttg
attttaaataatatcttaaatatttcatcttcatatattcaaaaatattatgatttaatt
aaagcaaaagagattaacaaagctctaacactatttcaagtaattacgcctatgaagggt
ggtttactaggggttgagaacttaaatatgcaattgcaaaagttatttaatcatacaaaa
ggtatggcatatcaaacaaaactttatgagtataagatcactgacaaagtaattcatatt
aaaaatgaaaatatgcgttcacaaacaatgagtatgtataaaagtggctctacggacttc
ttagaaaaaagagtatttaatggacaactaggtcttattatcaagcttgattttgaagaa
gaaaaatgtatagttttatacccaaatgatgatatggtcgtattttatgcttttgaaaat
atctcatctttattatctttagcttattgtttaactattcataaaacacaaggtatggag
tatgaaaatgctttaattcctatgagtttttctcattatattatgcataatacaaaacta
ctttataccgcaattactagagctaaaaaaatgtgttttatagttggagaagaagaagcc
ttcaaaagcgcatgtaaaaaactagaaataactattcgagaatctgtcataaacgatatg
ctaagtaaagcaaaggtaccacaaagagaactattagaggaattataa
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