Poseidonibacter lekithochrous: ALEK_2193
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Entry
ALEK_2193 CDS
T06860
Symbol
uvrA
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
alk
Poseidonibacter lekithochrous
Pathway
alk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ALEK_2193 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_2193 (uvrA)
DNA repair and recombination proteins [BR:
alk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ALEK_2193 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ALEK_2193 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
RsgA_GTPase
nSTAND1
AAA_25
nSTAND3
AAA_16
AAA_15
APS_kinase
DnaJ_CXXCXGXG
AAA_33
Viral_helicase1
SfsA
Motif
Other DBs
NCBI-ProteinID:
QKJ23453
LinkDB
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Position
2314136..2316949
Genome browser
AA seq
937 aa
AA seq
DB search
MQDTIKIFNAKENNLKNINLEIPKNKLIVFTGLSGSGKSTLAFDTLYAEGQRRYIESLSA
YARQFLDKVGKPDVERIEGLTPAIAIDQKTTSKNPRSTVGTITEVYDYFRLLYARVGKQH
CHQCGDPISQMSASDIIDQVLKLPENSKIVITAPLINRKKGTFADLLESLRGKGYVRAMI
DGVMARLDEEIELEKNKMHTIKVVIDRVVVKAESKERIAQDVEKGLKESFGELEIEVLNH
EAVGVEKHIHYSEHMACFNCKISFEPLEPLSFSFNSPKGACSSCDGLGIRYALDMKKVVN
DELPLEDGAIRIIYGFNKGFYFKMLIAYCEAAEIDVTIPFKELPEHQRKAVLHGGIEEAK
FEWKRHKLTRKWEGIVKLAYDMIKDEKDMAEFMTEKTCDSCNGNRLKPSSQSVFVAGKTI
SEVINKPIEDAHAFFQDEKNFEYFSEKYQMISAPILKEIKERIFFLNDVGLGYITLGRDA
RTISGGEAQRIRVASQIGSGLTGVMYVLDEPSIGLHERDTSKLIKTLKALQEKGNTVIVV
EHDKETIEAADYIVDIGPNAGKYGGEVVFNGTLKQMNKAKTLTAQYMTGKKKIDYQYNRP
QEEFIEIKNVTINNIKDLDVKIPLKNLCAITGVSGSGKSSLILQTLLPVAKELLNHARKV
KKVDGVEIEGLDVLDKVIYLDQSPIGRTPRSNPATYTGLMDELRGLFAKTKEAEIRGYKI
GRFSFNVKGGRCEKCQGEGEIKIEMHFLPDIMVKCDDCLGQRYNTQTLEIYYKGKNISDV
LNMSVDEALEFFIKVPKIHAKLKTLSDVGLGYITLGQNAVTLSGGEAQRIKLSKELSKKD
TGNTLYVLDEPTTGLHFADVDRLTKVLHHLVDLGNSVLVIEHNLDVVKNSDWVIDMGPEG
GNKGGLLVDEGTPKHLAANHKKSGSYTGYYLDKEFQN
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatactattaaaatatttaatgctaaagaaaacaatttaaaaaatattaattta
gaaataccaaaaaacaagcttattgtttttactggactttcaggttctggtaaatcaaca
ttagcttttgatacactttatgcggaaggtcaaagacgatatattgagtcattatcggct
tatgctagacagttcttagataaagtagggaaaccagatgttgaaagaattgaaggacta
acacctgcaattgcaattgatcagaaaacaacatctaaaaatccaagatcaacagtagga
acaatcacagaagtttatgattattttagacttttatatgcaagagttggaaaacaacat
tgtcatcaatgtggagatccaatttcacaaatgagtgcttctgatattattgatcaagta
ctaaaacttcctgaaaactctaagatagtaattactgcacctcttattaataggaaaaaa
ggtacttttgctgatttactagaatctctaagaggaaaaggttatgtaagagccatgatt
gatggagttatggctagacttgatgaagaaattgagcttgaaaaaaataaaatgcataca
atcaaagttgtaattgatagggttgtagtaaaagctgaaagtaaagaaagaattgcacaa
gatgttgaaaaaggtctaaaagagagttttggggaacttgaaatagaagttctaaatcac
gaagctgtaggagttgaaaaacatattcattactctgaacatatggcatgttttaattgt
aaaatctcttttgaacctttagagcctttatcattctcatttaactcaccaaaaggtgct
tgttcatcttgtgatggtttaggtattagatacgcattagatatgaaaaaagtagtaaat
gatgaactacctttagaagatggagctattagaattatctatggtttcaataaaggtttc
tattttaaaatgttaattgcttattgtgaagctgccgaaattgacgttactattccattt
aaagaacttccagaacaccaaagaaaagctgtattacatggtggaattgaagaagctaaa
tttgaatggaaaagacataaacttactagaaaatgggaaggaattgttaaattagcttat
gacatgatcaaagatgaaaaagacatggctgagtttatgacagagaaaacttgtgattct
tgtaatggtaatagattaaaaccctcttctcaaagtgtattcgttgcaggaaaaactatt
agtgaagttatcaataaaccaattgaagatgctcatgcctttttccaagatgagaaaaac
tttgaatattttagtgaaaaatatcaaatgatttcagctccaattttaaaagagattaaa
gagagaatattcttcttaaatgatgtaggacttggttatattactttaggtagagatgct
agaacaatttcaggtggagaagctcaaagaattagagttgcatcacaaattggttcaggt
cttacgggtgttatgtacgtacttgatgaaccttcaattggtttacatgaaagagataca
tctaaacttattaaaacacttaaagccttacaagaaaaaggtaatactgtaattgtagtt
gaacatgataaagagactattgaagctgctgattatattgtagatattggtccaaatgct
ggtaaatatggtggagaagttgtattcaatggaacacttaaacaaatgaataaagccaag
actttaacagctcaatatatgactggtaagaaaaagattgattaccaatacaatagacct
caagaagagtttattgaaattaaaaatgtaactattaataatattaaagacttagatgta
aaaattcctcttaaaaacctttgtgcaattacaggagtttcaggttctggtaaatcatct
ttaattttacaaactttattaccagttgcaaaagagttattaaaccatgcaagaaaagta
aaaaaagttgatggtgtagaaatcgaaggtttagacgtacttgataaagtaatttactta
gaccaatcacctattggaagaactccaagatctaaccctgcaacatatacaggattaatg
gatgaactaagaggtctgtttgctaaaacaaaagaagcagaaatcagaggttataaaatt
ggtagattctcatttaacgtaaaaggcggtagatgtgaaaaatgtcaaggagaaggtgaa
atcaaaattgagatgcacttcttaccagatattatggttaaatgtgacgactgtttaggt
caaagatataacacacaaactttagagatttactacaaaggtaaaaatatatctgatgta
ttaaatatgagtgtagatgaagcattagaattctttataaaagtaccaaaaattcatgcc
aaactaaaaacactttctgatgttggtttaggttatattactcttggtcaaaatgcagta
acactatcaggtggagaagctcagagaattaaactatctaaagagttaagtaaaaaagat
actggaaatactctttatgtattagatgaaccaacaactgggcttcactttgctgatgtt
gatagacttacaaaagtattacatcacttagttgatttaggaaattcagtattagtaatt
gaacataatcttgatgtagttaaaaactcagactgggtaattgatatgggtcctgaaggt
ggaaataaaggtgggttattagttgatgaaggtacaccaaaacacttagcagcaaatcat
aaaaaatctggttcttacactggatactatttagataaagagttccaaaactaa
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