Poseidonibacter lekithochrous: ALEK_3032
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Entry
ALEK_3032 CDS
T06860
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
alk
Poseidonibacter lekithochrous
Pathway
alk03030
DNA replication
alk03430
Mismatch repair
alk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ALEK_3032 (dnaX)
03430 Mismatch repair
ALEK_3032 (dnaX)
03440 Homologous recombination
ALEK_3032 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alk03032
]
ALEK_3032 (dnaX)
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_3032 (dnaX)
Enzymes [BR:
alk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ALEK_3032 (dnaX)
DNA replication proteins [BR:
alk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ALEK_3032 (dnaX)
DNA repair and recombination proteins [BR:
alk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ALEK_3032 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
ResIII
AAA_14
AAA_19
AAA_30
AAA_5
AAA_assoc_2
RCF1-5-like_lid
AAA_24
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QKJ24243
LinkDB
All DBs
Position
complement(3130823..3132856)
Genome browser
AA seq
677 aa
AA seq
DB search
MSDMMEKRVLALKYRPHRFEDLVGQSTVSQTLSLALDSNRLSHAYLFSGLRGSGKTSTAR
IMAKALLCFEGPTSKPCEVCDNCKSANANRHLDIIEMDAASNRGIDDIKDLIEHTKYKPS
SARFKVFIIDEVHMLTTQAFNALLKTLEEPPGFVKFILATTDPLKLPATILSRTQHFRFN
KIASSDVIHHLSHILNEENIDYESSALEILARTGQGSLRDTLTMLDQAIIFSKGKVTTSA
VVDMLGLIDPEVMDKIFTVVLNKGDITTIVRELENYEVSQVCDEMTIFLKHKMLAKDTRF
DLLLFDRFFRILSDAKQLLAMNSDGGFVLILTLMKMVEAVDIKTIDDIINQIQRIEPSQD
VAPMVVQSPVAPVAPLVEPTPVIQEPTPVKEAEAVVSAPIVEEKIVEEVKNETPIEERST
VEEELKNIVVEGVVNSNPFDDMPSSAPSVTPIPEPIMMPDDLPETKIEELTPADEVLVES
TSFVDLGLVDAIETVSYPNPFDEGMSAPIENQPVPEQTQAMQTPTPVVEQKQEELITPPA
PNESLETVVDEAVKEIVSQEVEVQAVEQQVPFNPSADVEVVPVEEPIPSKKTEVVENVLY
IKLTEKVYDRDYSLGECFEKNFIFRGFTDNKLSIASYAQGDDRKFLYKHFALIRTFAQDI
FGNEVELDFKKEEPRQA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatgatggaaaaaagagttttagcgttaaagtatagacctcatagatttgaa
gatttagtaggtcaaagtacagtttctcaaactttatcattagcgttagattcaaataga
ttatctcacgcatatttattcagtggattaagaggaagtggtaagacttctactgctaga
atcatggcaaaagctttattatgttttgagggtcctacttcaaaaccatgtgaagtatgt
gataattgtaaaagtgcaaatgcaaatagacacttggatattatagaaatggatgctgct
tcaaatagaggtattgatgatatcaaagacctgattgagcatacaaaatacaaaccaagt
tctgctagatttaaagtatttataatcgatgaagttcatatgcttactactcaagcattt
aatgctttattaaaaacactagaagaacctcctggatttgtgaagtttattcttgcaact
acagacccacttaaattacctgcaacaattctttcaagaactcagcattttagatttaat
aaaattgcatcttctgatgtaattcatcatttatcacatattttaaatgaagaaaatatt
gattatgaatcatctgctttagagattttagcaagaactggacaaggaagtttaagagat
actttaactatgcttgaccaagctattattttctcaaaaggaaaagtaactacatctgct
gttgttgatatgcttggacttattgaccctgaagtaatggacaaaatatttactgttgta
ttaaataaaggtgacattactactattgtaagagagttagaaaactatgaagtatcacaa
gtatgtgatgaaatgacaattttcttaaaacacaaaatgttagcaaaagatacaagattt
gatttacttttatttgatagattctttagaattttaagtgatgcaaaacaattacttgct
atgaattctgatggtggatttgtacttattttaacattaatgaaaatggtagaagctgtt
gatattaaaactattgacgatattatcaatcaaattcaaagaattgaaccaagtcaagat
gttgcaccaatggtagtacaatcaccagtggctcctgtagcacctctagttgaaccaaca
ccagtaatacaagaaccaactcctgtaaaagaagctgaagcagttgtttctgctcctatt
gttgaagaaaagatagttgaagaagtaaaaaatgaaacacctattgaagagagatcaaca
gtagaagaagagttgaaaaatattgtagttgaaggtgttgttaactctaatccttttgat
gatatgccaagttcagctccaagtgttacaccaattcctgagcctattatgatgccagat
gatttacctgaaactaaaatagaagagttaacaccagctgatgaagtattagtagagtcc
acttcttttgtagatttaggtttagtagatgctattgaaactgtgtcttatcctaatcct
tttgatgagggaatgtctgcacctattgaaaaccaaccagtaccagagcaaactcaagct
atgcaaacgccaacaccagtagttgagcaaaaacaagaagagcttataactccacctgca
cctaatgagagtttagaaacagtagttgatgaagcagtaaaagaaatagtttctcaagaa
gttgaagttcaagcagttgagcaacaagtaccatttaatccaagtgcagatgttgaagtt
gtacctgttgaagaaccaataccaagtaaaaaaactgaagttgtagagaatgttttatat
attaaattaactgaaaaagtttatgatagagattattcacttggtgaatgttttgagaaa
aactttattttcagaggttttactgataataaactttcaattgcttcttatgctcaaggt
gatgatagaaaattcttatataaacactttgctttaataagaacatttgctcaagatatc
tttggaaacgaagttgagctagattttaaaaaggaagaaccccgacaagcttaa
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