Poseidonibacter lekithochrous: ALEK_3329
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Entry
ALEK_3329 CDS
T06860
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
alk
Poseidonibacter lekithochrous
Pathway
alk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ALEK_3329 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_3329 (nfo)
Enzymes [BR:
alk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ALEK_3329 (nfo)
DNA repair and recombination proteins [BR:
alk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ALEK_3329 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QKJ24533
LinkDB
All DBs
Position
complement(3456343..3457188)
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AA seq
281 aa
AA seq
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MKYVGAHVSASGGVFNAPINARNIGAKAFALFVKNQRQWRVKDLETKVIDRWFKELEETG
IQAKHILPHDSYLINLGHPEEEKREKSLDGFLHEIERCEILKLDRLNFHPGSHLRKITED
ECLDRIALSLNQAIDATKDVKLVIENTAGQGSNLGYKFEHLAHIIDKVEDKSRIGVCIDT
CHMFTAGYDIRTREAYDKTWKEFDEVVGRQYLMGMHLNDSKPELGSRVDRHDSLGVGKIG
WDAFKFIMNDDRMDDIPMVLETIDEEIWPEEIQALYNLVEK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgttggagcacacgttagtgcaagtggtggtgtttttaatgccccaattaat
gctagaaatataggcgcaaaagcttttgctctttttgttaaaaatcaaagacaatggaga
gttaaagacttagaaactaaagtaattgatagatggtttaaagagttagaagagactgga
atacaagcaaaacatatattacctcatgactcatatcttatcaatttaggacaccctgaa
gaagagaaaagagaaaaatctttagacggttttttacatgaaattgaaagatgtgaaatc
ctaaaattagatagattaaactttcacccaggaagccacctaagaaagattactgaagat
gaatgtcttgatagaattgctctatctttaaatcaagcaattgatgctacaaaagatgta
aaattagtaattgaaaacacagcagggcaaggttcaaacttaggttataaatttgagcat
ttagcacatattattgataaagttgaagacaaaagcagaataggtgtatgtattgataca
tgtcacatgttcactgctggatatgacatcagaacaagagaagcatacgataaaacgtgg
aaagagtttgatgaagtagttggacgacaatacttaatgggtatgcacttaaatgactca
aaaccagaacttggttcaagagtagatagacatgactcacttggagttggtaaaattggt
tgggatgctttcaaattcattatgaatgatgatagaatggatgatattccaatggtttta
gaaactatcgatgaagaaatctggcctgaagagattcaagctttatataatttagtagag
aagtaa
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