Poseidonibacter lekithochrous: ALEK_3395
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Entry
ALEK_3395 CDS
T06860
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
alk
Poseidonibacter lekithochrous
Pathway
alk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ALEK_3395 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alk03400
]
ALEK_3395 (ung)
Enzymes [BR:
alk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ALEK_3395 (ung)
DNA repair and recombination proteins [BR:
alk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ALEK_3395 (ung)
Prokaryotic type
ALEK_3395 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Glyco_hydro_3_C
BAR_2
Motif
Other DBs
NCBI-ProteinID:
QKJ24591
LinkDB
All DBs
Position
complement(3527976..3528620)
Genome browser
AA seq
214 aa
AA seq
DB search
MTWEDFFKEEEKKDYYKNLISQVNKAYETTTVFPPKDKIYNAFDLTPLENTKVVLLGQDP
YHGAGQAQGLAFSTPEEIKNPPSMRNMLKEINEDIGSSHCENGDLTSWAKDGVLLINAIL
TVEEAKAKSHHKMGWEKFTDNLITFISNNCSDVVFILWGASAIKKQKIIDESKHHILSGV
HPSPLSAYRGFFGCKHFSQTNDILKSLGKEEITW
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacttgggaagatttttttaaagaagaagaaaaaaaagattactacaaaaacttaata
agccaagtaaacaaggcttatgaaactactacagtatttccaccaaaagataaaatatat
aatgcatttgatttaacaccactagaaaatactaaagttgtattacttggacaagaccca
tatcatggagcaggacaagcacaaggtttagctttttcaacgcctgaagagattaaaaac
ccaccatctatgagaaatatgttaaaagagataaatgaagatataggaagctctcattgt
gaaaatggagatttgacttcatgggcaaaagatggagttttattaataaatgccatttta
acagtagaagaagcaaaagcaaaatcacatcataaaatgggctgggaaaagtttactgat
aacctaatcacttttatttcaaacaattgcagtgatgttgtatttattttatggggtgcg
agcgctattaaaaaacaaaaaattattgatgaatcaaaacatcatattttaagtggagtt
catccaagtcccttatcagcgtatagaggtttttttggatgtaagcatttctctcaaaca
aatgatattttaaagagtttaggaaaagaagagattacgtggtag
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