Alkalibacter rhizosphaerae: J0B03_00480
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Entry
J0B03_00480 CDS
T07100
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alka
Alkalibacter rhizosphaerae
Pathway
alka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0B03_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alka03019
]
J0B03_00480
03016 Transfer RNA biogenesis [BR:
alka03016
]
J0B03_00480
Enzymes [BR:
alka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J0B03_00480
Messenger RNA biogenesis [BR:
alka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J0B03_00480
Transfer RNA biogenesis [BR:
alka03016
]
Prokaryotic type
tRNA degradation factors
J0B03_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
QSX08605
UniProt:
A0A975AIJ7
LinkDB
All DBs
Position
96356..98461
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AA seq
701 aa
AA seq
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MLKTFTMELGGRELKAEIGEMAELANGSVFMRYGQTNILVTACASKGPREGIDFFPLSCD
YEEKRYAVGKIPGGFIKREGRPSERAILTCRLMDRPLRPLFPKGFRNDVQVVATAMSICQ
DHAPEVVSMIGSSIALSISNIPFQGPTGSVIIGYVDGEYVVNPTAQQQEVSDLHLTVSGT
KEAIMMVEAGSNEVSEEVMLKGILRAHEEIKKIVAFIESIVDEVGEEKMDYPVAKPVEEV
EAEVRAFATEKFVEAIQTEEKLERQEKIDQVNALVQETFAEKYPENIKDIKDVCYNLLKE
QVRRMIVEEGIRPDNRKTDEIRPIWSKVGLLDRVHGSGMFTRGQTQVVSALTLGAMGDVQ
IIDGFTDEEVSKRYMHHYNFPAFSVGETRPLRGPGRREIGHGALAERALLPVIPSEEDFP
YAIRVVSEVISSNGSTSQASVCGSSLALMDAGVPIRSAVAGIAMGLIKEGDKVAVLSDIQ
GMEDFLGDMDFKVAGTREGITAIQMDIKIDGIDEAILKDALEKARVGRLFILDKMNEVIS
APREDLSPYAPRIISMMIHPDKIREVIGSGGKVINKIISDTGVKIDIDDDGRVFIASPDL
EAAERAKAIIEGIVKEVEVGEVITGKVTRLMNFGAFVDIGGSKEGMIHISKLAHERVEKV
EDVVAVGDEVTVKVMEIDKQGRINLSRKATLPRPANKDNDK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaacatttaccatggaactaggcggtagggaattgaaagcagagatcggagaa
atggcggaactggccaacggatccgtttttatgcgatatggtcaaaccaatattctggtg
accgcttgtgcgtccaaaggaccgagagaaggcatcgacttttttccgttgagttgcgat
tatgaggaaaaaagatatgctgtcggcaaaataccgggtggattcattaaacgggaagga
cgaccttcagaacgagccatattgacttgtcgtctaatggaccgaccacttcgcccactg
tttccaaaaggtttccgcaatgatgttcaggtagtggctacagccatgagcatttgccag
gatcacgcgccggaagtggtgtccatgatcggttcatcaatagcactatccatcagcaac
attcccttccaaggacctaccggttctgtgatcatcgggtacgtagacggagaatacgta
gttaaccctacagcacaacagcaagaagtcagcgatctgcacttaacggtttccggaaca
aaagaagccatcatgatggtagaagccggcagcaatgaagtcagtgaagaagtaatgtta
aaaggtattttgcgagcacatgaagaaatcaagaagatcgttgctttcatcgaatccatc
gtagacgaagtcggtgaagaaaaaatggattatcctgttgcgaaaccagtggaagaagta
gaagcagaagttcgagcattcgcaacggaaaaatttgtggaagcgatccagaccgaagaa
aaattggaacgacaagaaaagatcgatcaagtcaatgcactggtgcaagaaacctttgca
gaaaaatatccggaaaatataaaagacatcaaggatgtttgttataacttgttgaaagaa
caagttcgacgaatgatcgtagaagaaggaattcgaccggacaaccgaaaaacggacgaa
attcgtcctatttggtcgaaagtcggcttgctggatcgagtacacggttccggcatgttt
accagaggccagacccaagtcgtgtctgcattgacattgggagccatgggtgacgttcag
atcatcgacggttttaccgacgaggaagtaagcaaacgttacatgcatcactataatttc
ccggctttcagcgtaggcgagacccgtcccctgcgaggacccggtcgacgtgagatcggt
cacggagccttggcggaacgagcgttgttgcccgttatcccatcggaagaagatttccct
tacgccattcgagtggtctcggaagtcatcagttccaacggatccacatcccaggccagt
gtctgcggaagttctttggccttgatggatgcaggagtgcccatccgatctgctgttgca
ggtattgccatgggattgatcaaggaaggcgacaaagtagctgtattgtccgatatccag
ggaatggaagacttcctgggagacatggacttcaaagtggctggaacgagagaaggaatc
acagccatccaaatggacatcaaaatcgacggcatcgatgaagccatcctgaaagatgct
ttggaaaaagcccgtgtaggaagactgtttatcctggacaaaatgaatgaagtgatctct
gctccaagagaagatctctcaccatacgctccgagaatcatctccatgatgatccatccg
gacaagatccgtgaagtcattggatccggtggaaaagtcatcaacaagatcatcagcgat
accggtgtcaaaatcgacatcgacgacgatggaagagttttcatcgcatctccggatctg
gaagcggcggaaagagcaaaagccatcattgaaggcatagtcaaagaagtggaagtaggc
gaagtcatcaccggcaaagtcacccgtttgatgaactttggcgcattcgtcgatattggc
ggaagcaaggaaggaatgatccacatttccaaactggcccatgagcgggtggagaaggtg
gaagacgtggtcgctgtcggcgacgaagtgaccgtaaaggtcatggagatcgacaagcag
ggtcgaatcaacctgtctcgaaaagctactttgcccagacctgcaaataaagacaacgac
aagtga
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