KEGG   Alkalibacter rhizosphaerae: J0B03_00525
Entry
J0B03_00525       CDS       T07100                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
alka  Alkalibacter rhizosphaerae
Pathway
alka03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:alka00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J0B03_00525 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alka03019]
    J0B03_00525 (rny)
Messenger RNA biogenesis [BR:alka03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     J0B03_00525 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH Propep_M14 KH_2
Other DBs
NCBI-ProteinID: QSX09616
UniProt: A0A974XPG9
LinkDB
Position
107878..109425
AA seq 515 aa
MEALGNYIILVIVGFTLIAFVAGYFVRKNIAEGKINSAEETAKRIVEDALKDADSQAKEM
LFNAKEEAHNTRMEVEKENRERRNEIQRLEKRLIQREENIDKRSEQIQSKEDSLNNKMNQ
LNNKEAKLDEMIENEMKELERISGLTFEEAKQILLGDVEKKIRRESAMLIKQIEGNAKDE
ADKKAKEILSYAIQKVAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLI
IDDTPEAVILSGFDPIRREIARVALEKLIIDGRIHPARIEEMVEKAKKEIDQQIKEDGEQ
ASFDTGIHGLHPEIIKLLGRLRFRTSYGQNVLKHSIEVAHLASIMAHELGVNAKVAKRAG
LLHDIGKAVDHEVEGPHIEIGVDILRRYKESSQVIHAVEAHHGDVEATSVEAVLVQAADA
ISAARPGARRETLVSYIKRLEKLEEIANSFDGIEKTFAIQAGREVRIMVKPDKIDDVEMI
HVAKEIAAKIQSEMDYPGQIKVNVIRETRTIEYAK
NT seq 1548 nt   +upstreamnt  +downstreamnt
attgaggcattaggaaactacatcattcttgttattgttggtttcacattgatcgctttt
gttgcaggatattttgtacgaaagaacatcgctgaaggcaagataaacagtgctgaagag
actgcaaaaagaattgtggaagatgcattgaaagatgcagattcacaagcaaaagaaatg
cttttcaatgcaaaagaggaagcacacaataccagaatggaagtagaaaaagaaaatcga
gaaagacgcaacgagatccaacggctggagaaaagattgatccagcgggaggaaaacatc
gataaaagaagcgaacagatccaaagcaaggaagacagcctaaacaacaaaatgaaccaa
ctaaacaacaaggaagccaagttggatgaaatgatcgaaaatgaaatgaaggaactggag
cgaatctccggtctgacatttgaagaagccaagcagatcttgcttggtgatgtggagaaa
aaaattcgaagagagtctgccatgttgatcaaacagatcgaaggcaatgcaaaagacgaa
gcggacaaaaaagcaaaagaaatcctttcatacgccatacaaaaggtggccgcagatcac
gtggcagaaaccacagtatctgttgtcaacttgcctaatgacgaaatgaaaggccgcatc
atcggtcgggaaggtcgaaacatacgaacactggaaacgttgaccggtatcgacttgatc
attgacgacacgccggaagcagtcatcttgtcgggattcgatcccatacgacgagaaatt
gcacgagtggctttggaaaaacttatcattgatggccggatccatccagctagaatcgaa
gaaatggtggaaaaagccaaaaaggaaatcgatcagcaaatcaaggaagacggagaacaa
gccagcttcgatactgggatccacggattgcatccggagatcatcaaattgctgggacga
ttgcgttttagaaccagttacggtcaaaacgtgctgaagcattccatcgaagtcgctcat
cttgcgtccatcatggcacacgaactgggtgtcaatgccaaagtagcgaaaagagccgga
ttgcttcacgatatcggaaaagccgtagatcacgaagtggaaggtcctcacatcgaaatc
ggtgtggacattttgagaagatataaagaatccagccaagtgatccatgcagtagaagca
catcacggtgacgtggaagcaacatccgttgaagcagtattggtccaggcagcagatgcc
atatcggcagcgagaccgggagcaagaagagaaacattggtatcgtacataaaacgactg
gagaaattggaggaaattgcaaactcattcgatggtatagaaaaaacatttgcaatccaa
gctggccgagaagtacgaatcatggtaaaaccggataagatcgacgacgtggaaatgatc
catgtagcaaaggagatcgcagctaagatccagagcgaaatggattatccaggacaaatc
aaagtcaatgtgatccgagaaacaagaactatagagtatgcaaaataa

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